Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | ACJEHK_RS10035 | Genome accession | NZ_CP174242 |
| Coordinates | 2226189..2226503 (-) | Length | 104 a.a. |
| NCBI ID | WP_011215961.1 | Uniprot ID | Q5WV44 |
| Organism | Legionella pneumophila strain SPF583 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2221189..2231503
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJEHK_RS10010 (ACJEHK_10010) | - | 2221614..2222114 (-) | 501 | WP_129904980.1 | hypothetical protein | - |
| ACJEHK_RS10015 (ACJEHK_10015) | - | 2222606..2223466 (+) | 861 | WP_181444925.1 | polysaccharide deacetylase family protein | - |
| ACJEHK_RS10020 (ACJEHK_10020) | - | 2223584..2224780 (-) | 1197 | WP_027265081.1 | murein transglycosylase A | - |
| ACJEHK_RS10025 (ACJEHK_10025) | lpp1976 | 2224890..2225447 (-) | 558 | WP_011215959.1 | hypothetical protein | Machinery gene |
| ACJEHK_RS10030 (ACJEHK_10030) | lpp1977 | 2225444..2226250 (-) | 807 | WP_011215960.1 | PilW family protein | Machinery gene |
| ACJEHK_RS10035 (ACJEHK_10035) | lpp1978 | 2226189..2226503 (-) | 315 | WP_011215961.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| ACJEHK_RS10040 (ACJEHK_10040) | hisC | 2226663..2227772 (+) | 1110 | WP_011215962.1 | histidinol-phosphate transaminase | - |
| ACJEHK_RS10045 (ACJEHK_10045) | - | 2227809..2228150 (+) | 342 | WP_011215963.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| ACJEHK_RS10050 (ACJEHK_10050) | secF | 2228340..2229257 (-) | 918 | WP_011215964.1 | protein translocase subunit SecF | - |
| ACJEHK_RS10055 (ACJEHK_10055) | secD | 2229270..2231126 (-) | 1857 | WP_011215965.1 | protein translocase subunit SecD | - |
| ACJEHK_RS10060 (ACJEHK_10060) | yajC | 2231148..2231483 (-) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12327.37 Da Isoelectric Point: 8.4863
>NTDB_id=1076397 ACJEHK_RS10035 WP_011215961.1 2226189..2226503(-) (lpp1978) [Legionella pneumophila strain SPF583]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEAFYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRSYELDAN
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEAFYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRSYELDAN
Nucleotide
Download Length: 315 bp
>NTDB_id=1076397 ACJEHK_RS10035 WP_011215961.1 2226189..2226503(-) (lpp1978) [Legionella pneumophila strain SPF583]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTCG
ATGAAGCATTCTATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACATGGTTTAAAAAAAGCCAGTCCATTATTCGCTCCTATGAGCTGGATGCTAATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTCG
ATGAAGCATTCTATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACATGGTTTAAAAAAAGCCAGTCCATTATTCGCTCCTATGAGCTGGATGCTAATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
94.231 |
100 |
0.942 |
| lpp1978 | Legionella pneumophila str. Paris |
92.308 |
100 |
0.923 |