Detailed information    

insolico Bioinformatically predicted

Overview


Name   lqsT   Type   Regulator
Locus tag   ACJEIC_RS12430 Genome accession   NZ_CP174240
Coordinates   2786656..2787918 (+) Length   420 a.a.
NCBI ID   WP_011216388.1    Uniprot ID   Q5WTU5
Organism   Legionella pneumophila strain SPF585     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 2781656..2792918
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJEIC_RS12420 (ACJEIC_12420) ceg32 2782544..2785372 (+) 2829 WP_011216386.1 Dot/Icm T4SS effector Ceg32/SidI -
  ACJEIC_RS12425 (ACJEIC_12425) mesI 2785374..2786261 (+) 888 WP_080020749.1 Dot/Icm T4SS effector metaeffector MesI -
  ACJEIC_RS12430 (ACJEIC_12430) lqsT 2786656..2787918 (+) 1263 WP_011216388.1 HAMP domain-containing sensor histidine kinase Regulator
  ACJEIC_RS12435 (ACJEIC_12435) - 2787966..2788661 (-) 696 WP_011216389.1 iron-containing redox enzyme family protein -
  ACJEIC_RS12440 (ACJEIC_12440) sdjA 2789058..2791481 (-) 2424 WP_011216390.1 Dot/Icm T4SS effector SdjA -
  ACJEIC_RS12445 (ACJEIC_12445) dupB 2791552..2792745 (-) 1194 WP_080020750.1 Dot/Icm T4SS effector deubiquitinase DupB/LaiF -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 48598.99 Da        Isoelectric Point: 7.9744

>NTDB_id=1076318 ACJEIC_RS12430 WP_011216388.1 2786656..2787918(+) (lqsT) [Legionella pneumophila strain SPF585]
MQRLKNIFTAIYQYLLKETEDASHQITLFGIVMMINYPLFGVFWKLEHFQLTEEFILRITAALLCACLAFNQFWPRQLLK
FLPVFWYIVLLFCLPYFFAYLTLINNGSTLWLMNCVSAIFFLLLVSSVLGALVLLVSGVGLAFFHFYILSNNQFVYIPGT
ISLFSLIVTFIAAIIIGALFARDREITYAGRLSGMRMLAGSIAHDLRTPLASIYLQAELQELIVERLNNPEVQKDLKENL
SKITRGIEMSNQLIRMQLNNIQRDKLDTSTFAIYSIKKLLKASLEEYPFKENQKSLIHLNDKNDFSIWIDEVGFKNMMWN
LLKNSLEYIEETHKGEISIWLEQGWEKENFNYLHIKDTAKGLNHKEYEKIFDFFYSGRKDGTGLGLAYCKLLMQAAGGDI
SCKGKKNEFAHFTLKFPKID

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=1076318 ACJEIC_RS12430 WP_011216388.1 2786656..2787918(+) (lqsT) [Legionella pneumophila strain SPF585]
ATGCAAAGGTTAAAAAATATATTTACTGCAATTTACCAATATTTATTAAAAGAAACTGAAGATGCAAGCCACCAAATCAC
TTTATTTGGCATCGTCATGATGATTAATTACCCTCTTTTCGGAGTTTTCTGGAAACTGGAGCATTTTCAACTGACAGAAG
AATTTATTTTACGCATCACTGCAGCCCTCCTCTGTGCCTGTTTGGCATTTAATCAATTTTGGCCAAGACAATTATTAAAA
TTTCTACCTGTTTTTTGGTATATAGTTCTTCTCTTTTGTTTACCTTACTTTTTTGCTTATTTGACTCTCATAAACAATGG
CTCAACTCTTTGGCTAATGAATTGCGTATCCGCTATCTTTTTTCTTTTATTAGTCTCCAGTGTGTTGGGAGCTCTTGTAT
TGCTTGTATCAGGTGTTGGACTTGCTTTTTTTCATTTTTATATTTTATCAAATAATCAGTTTGTCTATATCCCAGGAACC
ATATCACTTTTTAGTTTAATTGTTACGTTTATTGCAGCAATAATCATTGGTGCTTTGTTTGCACGAGATAGAGAAATTAC
CTATGCCGGACGTTTATCGGGTATGCGCATGCTGGCTGGAAGTATCGCTCATGATTTAAGAACGCCGCTTGCCAGTATTT
ATTTACAAGCGGAATTACAGGAATTGATTGTCGAAAGATTAAATAATCCAGAAGTTCAAAAGGACCTGAAGGAAAATTTA
AGCAAAATTACTCGCGGTATAGAAATGAGTAATCAATTAATTCGTATGCAATTAAATAATATTCAACGAGACAAATTAGA
TACCAGTACATTTGCGATTTATTCCATCAAAAAATTACTCAAGGCGTCTTTAGAAGAATACCCTTTCAAAGAAAATCAAA
AATCATTGATTCATTTAAATGATAAAAATGATTTTTCCATATGGATTGATGAAGTGGGTTTTAAAAATATGATGTGGAAT
TTGCTAAAAAATAGTCTGGAATATATTGAGGAAACCCATAAAGGCGAAATCTCTATCTGGCTAGAACAAGGATGGGAGAA
AGAGAATTTTAATTACCTCCATATAAAAGATACAGCTAAAGGTTTAAATCATAAAGAATATGAAAAAATATTTGATTTCT
TCTATTCTGGCAGAAAAGATGGAACTGGTTTAGGCTTGGCCTATTGCAAACTTCTGATGCAAGCAGCAGGTGGTGATATT
TCGTGTAAAGGGAAAAAAAATGAATTCGCTCATTTCACTTTAAAATTCCCCAAAATTGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q5WTU5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  lqsT Legionella pneumophila subsp. pneumophila str. Philadelphia 1

99.048

100

0.99


Multiple sequence alignment