Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | ACJEIC_RS10035 | Genome accession | NZ_CP174240 |
| Coordinates | 2226045..2226359 (-) | Length | 104 a.a. |
| NCBI ID | WP_011215961.1 | Uniprot ID | Q5WV44 |
| Organism | Legionella pneumophila strain SPF585 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2221045..2231359
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJEIC_RS10010 (ACJEIC_10010) | - | 2221470..2221970 (-) | 501 | WP_129904980.1 | hypothetical protein | - |
| ACJEIC_RS10015 (ACJEIC_10015) | - | 2222462..2223322 (+) | 861 | WP_181444925.1 | polysaccharide deacetylase family protein | - |
| ACJEIC_RS10020 (ACJEIC_10020) | - | 2223440..2224636 (-) | 1197 | WP_027265081.1 | murein transglycosylase A | - |
| ACJEIC_RS10025 (ACJEIC_10025) | lpp1976 | 2224746..2225303 (-) | 558 | WP_011215959.1 | hypothetical protein | Machinery gene |
| ACJEIC_RS10030 (ACJEIC_10030) | lpp1977 | 2225300..2226106 (-) | 807 | WP_011215960.1 | PilW family protein | Machinery gene |
| ACJEIC_RS10035 (ACJEIC_10035) | lpp1978 | 2226045..2226359 (-) | 315 | WP_011215961.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| ACJEIC_RS10040 (ACJEIC_10040) | hisC | 2226519..2227628 (+) | 1110 | WP_011215962.1 | histidinol-phosphate transaminase | - |
| ACJEIC_RS10045 (ACJEIC_10045) | - | 2227665..2228006 (+) | 342 | WP_011215963.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| ACJEIC_RS10050 (ACJEIC_10050) | secF | 2228196..2229113 (-) | 918 | WP_011215964.1 | protein translocase subunit SecF | - |
| ACJEIC_RS10055 (ACJEIC_10055) | secD | 2229126..2230982 (-) | 1857 | WP_011215965.1 | protein translocase subunit SecD | - |
| ACJEIC_RS10060 (ACJEIC_10060) | yajC | 2231004..2231339 (-) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12327.37 Da Isoelectric Point: 8.4863
>NTDB_id=1076313 ACJEIC_RS10035 WP_011215961.1 2226045..2226359(-) (lpp1978) [Legionella pneumophila strain SPF585]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEAFYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRSYELDAN
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEAFYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRSYELDAN
Nucleotide
Download Length: 315 bp
>NTDB_id=1076313 ACJEIC_RS10035 WP_011215961.1 2226045..2226359(-) (lpp1978) [Legionella pneumophila strain SPF585]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTCG
ATGAAGCATTCTATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACATGGTTTAAAAAAAGCCAGTCCATTATTCGCTCCTATGAGCTGGATGCTAATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTCG
ATGAAGCATTCTATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACATGGTTTAAAAAAAGCCAGTCCATTATTCGCTCCTATGAGCTGGATGCTAATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
94.231 |
100 |
0.942 |
| lpp1978 | Legionella pneumophila str. Paris |
92.308 |
100 |
0.923 |