Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | ACJEIC_RS03800 | Genome accession | NZ_CP174240 |
| Coordinates | 799231..799938 (-) | Length | 235 a.a. |
| NCBI ID | WP_080020479.1 | Uniprot ID | - |
| Organism | Legionella pneumophila strain SPF585 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 794231..804938
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJEIC_RS03785 (ACJEIC_03785) | - | 797106..797618 (-) | 513 | WP_011214849.1 | pilus assembly protein | - |
| ACJEIC_RS03790 (ACJEIC_03790) | - | 797615..798682 (-) | 1068 | WP_011214850.1 | PilW family protein | - |
| ACJEIC_RS03795 (ACJEIC_03795) | pilV | 798679..799218 (-) | 540 | WP_011214851.1 | type IV pilus modification protein PilV | - |
| ACJEIC_RS03800 (ACJEIC_03800) | fimT | 799231..799938 (-) | 708 | WP_080020479.1 | GspH/FimT family pseudopilin | Machinery gene |
| ACJEIC_RS03805 (ACJEIC_03805) | - | 800166..801026 (-) | 861 | WP_011214853.1 | polysaccharide deacetylase family protein | - |
| ACJEIC_RS03810 (ACJEIC_03810) | - | 801203..802552 (-) | 1350 | WP_080020481.1 | lpg0634 family Dot/Icm T4SS effector | - |
| ACJEIC_RS03815 (ACJEIC_03815) | - | 802846..804327 (+) | 1482 | WP_011214855.1 | glycosyltransferase family 39 protein | - |
Sequence
Protein
Download Length: 235 a.a. Molecular weight: 24931.68 Da Isoelectric Point: 8.5054
>NTDB_id=1076289 ACJEIC_RS03800 WP_080020479.1 799231..799938(-) (fimT) [Legionella pneumophila strain SPF585]
MNKVITESQKFTLRNITNMLFCVKSSVLPAQSNIAQKIQKKGIIYNDLCKDGFDTEVPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWNNGALNCP
MNKVITESQKFTLRNITNMLFCVKSSVLPAQSNIAQKIQKKGIIYNDLCKDGFDTEVPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWNNGALNCP
Nucleotide
Download Length: 708 bp
>NTDB_id=1076289 ACJEIC_RS03800 WP_080020479.1 799231..799938(-) (fimT) [Legionella pneumophila strain SPF585]
TTGAACAAAGTGATAACGGAATCACAAAAGTTCACTCTGCGCAACATAACTAATATGTTATTTTGCGTTAAGAGTAGTGT
ATTGCCCGCACAATCTAATATAGCACAAAAGATACAAAAAAAAGGCATAATATACAATGATCTTTGTAAAGACGGCTTCG
ATACTGAGGTCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATCATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAACCGTTTGACTTCAAACATTGACTC
ACTGGTAAGTTCATTAAACTATGCGCGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTATGTCCATTAGGTTCGC
CAGGTTCAACGGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGGGCACCAACGCTT
TTAAAATCGCACCAGACTTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACGACCCAAAGCAACTTCACTATGTGTGATAACAGAGGCAATGCGTTTGCTCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCCGGAACAACACCCGGCCAGGCAGTCTGGAATAATGGAGCTCTGAACTGCCCTTAA
TTGAACAAAGTGATAACGGAATCACAAAAGTTCACTCTGCGCAACATAACTAATATGTTATTTTGCGTTAAGAGTAGTGT
ATTGCCCGCACAATCTAATATAGCACAAAAGATACAAAAAAAAGGCATAATATACAATGATCTTTGTAAAGACGGCTTCG
ATACTGAGGTCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATCATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAACCGTTTGACTTCAAACATTGACTC
ACTGGTAAGTTCATTAAACTATGCGCGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTATGTCCATTAGGTTCGC
CAGGTTCAACGGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGGGCACCAACGCTT
TTAAAATCGCACCAGACTTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACGACCCAAAGCAACTTCACTATGTGTGATAACAGAGGCAATGCGTTTGCTCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCCGGAACAACACCCGGCCAGGCAGTCTGGAATAATGGAGCTCTGAACTGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Legionella pneumophila strain Lp02 |
96.596 |
100 |
0.966 |