Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | ACJEH6_RS10040 | Genome accession | NZ_CP174239 |
| Coordinates | 2226063..2226377 (-) | Length | 104 a.a. |
| NCBI ID | WP_011215961.1 | Uniprot ID | Q5WV44 |
| Organism | Legionella pneumophila strain SPF586 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2221063..2231377
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJEH6_RS10015 (ACJEH6_10015) | - | 2221488..2221988 (-) | 501 | WP_129904980.1 | hypothetical protein | - |
| ACJEH6_RS10020 (ACJEH6_10020) | - | 2222480..2223340 (+) | 861 | WP_181444925.1 | polysaccharide deacetylase family protein | - |
| ACJEH6_RS10025 (ACJEH6_10025) | - | 2223458..2224654 (-) | 1197 | WP_027265081.1 | murein transglycosylase A | - |
| ACJEH6_RS10030 (ACJEH6_10030) | lpp1976 | 2224764..2225321 (-) | 558 | WP_011215959.1 | hypothetical protein | Machinery gene |
| ACJEH6_RS10035 (ACJEH6_10035) | lpp1977 | 2225318..2226124 (-) | 807 | WP_011215960.1 | PilW family protein | Machinery gene |
| ACJEH6_RS10040 (ACJEH6_10040) | lpp1978 | 2226063..2226377 (-) | 315 | WP_011215961.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| ACJEH6_RS10045 (ACJEH6_10045) | hisC | 2226537..2227646 (+) | 1110 | WP_011215962.1 | histidinol-phosphate transaminase | - |
| ACJEH6_RS10050 (ACJEH6_10050) | - | 2227683..2228024 (+) | 342 | WP_011215963.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| ACJEH6_RS10055 (ACJEH6_10055) | secF | 2228214..2229131 (-) | 918 | WP_011215964.1 | protein translocase subunit SecF | - |
| ACJEH6_RS10060 (ACJEH6_10060) | secD | 2229144..2231000 (-) | 1857 | WP_011215965.1 | protein translocase subunit SecD | - |
| ACJEH6_RS10065 (ACJEH6_10065) | yajC | 2231022..2231357 (-) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12327.37 Da Isoelectric Point: 8.4863
>NTDB_id=1076271 ACJEH6_RS10040 WP_011215961.1 2226063..2226377(-) (lpp1978) [Legionella pneumophila strain SPF586]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEAFYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRSYELDAN
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEAFYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRSYELDAN
Nucleotide
Download Length: 315 bp
>NTDB_id=1076271 ACJEH6_RS10040 WP_011215961.1 2226063..2226377(-) (lpp1978) [Legionella pneumophila strain SPF586]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTCG
ATGAAGCATTCTATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACATGGTTTAAAAAAAGCCAGTCCATTATTCGCTCCTATGAGCTGGATGCTAATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTCG
ATGAAGCATTCTATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACATGGTTTAAAAAAAGCCAGTCCATTATTCGCTCCTATGAGCTGGATGCTAATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
94.231 |
100 |
0.942 |
| lpp1978 | Legionella pneumophila str. Paris |
92.308 |
100 |
0.923 |