Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | ACJEHH_RS14970 | Genome accession | NZ_CP174238 |
| Coordinates | 3348272..3348586 (+) | Length | 104 a.a. |
| NCBI ID | WP_011215961.1 | Uniprot ID | Q5WV44 |
| Organism | Legionella pneumophila strain SPF587 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3343272..3353586
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJEHH_RS14945 (ACJEHH_14945) | yajC | 3343292..3343627 (+) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
| ACJEHH_RS14950 (ACJEHH_14950) | secD | 3343649..3345505 (+) | 1857 | WP_011215965.1 | protein translocase subunit SecD | - |
| ACJEHH_RS14955 (ACJEHH_14955) | secF | 3345518..3346435 (+) | 918 | WP_011215964.1 | protein translocase subunit SecF | - |
| ACJEHH_RS14960 (ACJEHH_14960) | - | 3346625..3346966 (-) | 342 | WP_011215963.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| ACJEHH_RS14965 (ACJEHH_14965) | hisC | 3347003..3348112 (-) | 1110 | WP_011215962.1 | histidinol-phosphate transaminase | - |
| ACJEHH_RS14970 (ACJEHH_14970) | lpp1978 | 3348272..3348586 (+) | 315 | WP_011215961.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| ACJEHH_RS14975 (ACJEHH_14975) | lpp1977 | 3348525..3349331 (+) | 807 | WP_011215960.1 | PilW family protein | Machinery gene |
| ACJEHH_RS14980 (ACJEHH_14980) | lpp1976 | 3349328..3349885 (+) | 558 | WP_011215959.1 | hypothetical protein | Machinery gene |
| ACJEHH_RS14985 (ACJEHH_14985) | - | 3349995..3351191 (+) | 1197 | WP_027265081.1 | murein transglycosylase A | - |
| ACJEHH_RS14990 (ACJEHH_14990) | - | 3351309..3352169 (-) | 861 | WP_181444925.1 | polysaccharide deacetylase family protein | - |
| ACJEHH_RS14995 (ACJEHH_14995) | - | 3352661..3353161 (+) | 501 | WP_129904980.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12327.37 Da Isoelectric Point: 8.4863
>NTDB_id=1076239 ACJEHH_RS14970 WP_011215961.1 3348272..3348586(+) (lpp1978) [Legionella pneumophila strain SPF587]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEAFYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRSYELDAN
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEAFYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRSYELDAN
Nucleotide
Download Length: 315 bp
>NTDB_id=1076239 ACJEHH_RS14970 WP_011215961.1 3348272..3348586(+) (lpp1978) [Legionella pneumophila strain SPF587]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTCG
ATGAAGCATTCTATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACATGGTTTAAAAAAAGCCAGTCCATTATTCGCTCCTATGAGCTGGATGCTAATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTCG
ATGAAGCATTCTATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACATGGTTTAAAAAAAGCCAGTCCATTATTCGCTCCTATGAGCTGGATGCTAATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
94.231 |
100 |
0.942 |
| lpp1978 | Legionella pneumophila str. Paris |
92.308 |
100 |
0.923 |