Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilZ   Type   Machinery gene
Locus tag   ACJEHH_RS02720 Genome accession   NZ_CP174238
Coordinates   613813..614154 (-) Length   113 a.a.
NCBI ID   WP_025519545.1    Uniprot ID   A0A128V7G5
Organism   Legionella pneumophila strain SPF587     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 608813..619154
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJEHH_RS02700 (ACJEHH_02700) - 609054..610334 (+) 1281 WP_408073444.1 MFS transporter -
  ACJEHH_RS02705 (ACJEHH_02705) - 610409..611701 (-) 1293 WP_070322037.1 MFS transporter -
  ACJEHH_RS02710 (ACJEHH_02710) - 611757..612857 (-) 1101 WP_011215419.1 anhydro-N-acetylmuramic acid kinase -
  ACJEHH_RS02715 (ACJEHH_02715) - 612969..613757 (-) 789 WP_011215418.1 TatD family hydrolase -
  ACJEHH_RS02720 (ACJEHH_02720) pilZ 613813..614154 (-) 342 WP_025519545.1 PilZ domain-containing protein Machinery gene
  ACJEHH_RS02725 (ACJEHH_02725) - 614280..615185 (-) 906 WP_011215416.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  ACJEHH_RS02730 (ACJEHH_02730) tmk 615182..615820 (-) 639 WP_011215415.1 dTMP kinase -
  ACJEHH_RS02735 (ACJEHH_02735) mltG 615820..616818 (-) 999 WP_011215414.1 endolytic transglycosylase MltG -
  ACJEHH_RS02740 (ACJEHH_02740) fabF 616819..618057 (-) 1239 WP_011215413.1 beta-ketoacyl-ACP synthase II -
  ACJEHH_RS02745 (ACJEHH_02745) acpP 618076..618324 (-) 249 WP_003631752.1 acyl carrier protein -

Sequence


Protein


Download         Length: 113 a.a.        Molecular weight: 12521.54 Da        Isoelectric Point: 8.2421

>NTDB_id=1076212 ACJEHH_RS02720 WP_025519545.1 613813..614154(-) (pilZ) [Legionella pneumophila strain SPF587]
MTEKPQLINCSFPNEASLYMAYMPFVKGGGLFIRTQHVYSLGQSLELSVKLLNENEPYLVTGKIVWITPKGAQGNKPPGV
GIQFTGENSRYLCNKIETYLAGMLKSCQVTDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=1076212 ACJEHH_RS02720 WP_025519545.1 613813..614154(-) (pilZ) [Legionella pneumophila strain SPF587]
ATGACCGAAAAACCACAGCTTATAAATTGCTCATTTCCCAATGAAGCATCTTTGTACATGGCTTACATGCCTTTTGTGAA
AGGTGGCGGTCTTTTTATAAGAACTCAACACGTTTATTCTCTAGGGCAGTCGCTTGAATTATCTGTTAAATTGCTCAATG
AAAATGAACCATATTTGGTCACTGGTAAAATAGTCTGGATTACTCCTAAAGGTGCACAAGGCAATAAGCCGCCGGGAGTT
GGTATTCAATTTACCGGTGAAAACAGTCGTTATCTATGTAACAAGATAGAAACTTATTTGGCAGGAATGCTAAAATCATG
TCAGGTTACAGATACTATATAG

Domains


Predicted by InterproScan.

(8-101)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A128V7G5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

100

100

1

  pilZ Legionella pneumophila strain ERS1305867

100

100

1


Multiple sequence alignment