Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | ACJEHP_RS10050 | Genome accession | NZ_CP174237 |
| Coordinates | 2224948..2225262 (-) | Length | 104 a.a. |
| NCBI ID | WP_011215961.1 | Uniprot ID | Q5WV44 |
| Organism | Legionella pneumophila strain SPF588 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2219948..2230262
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJEHP_RS10025 (ACJEHP_10025) | - | 2220373..2220873 (-) | 501 | WP_129904980.1 | hypothetical protein | - |
| ACJEHP_RS10030 (ACJEHP_10030) | - | 2221365..2222225 (+) | 861 | WP_181444925.1 | polysaccharide deacetylase family protein | - |
| ACJEHP_RS10035 (ACJEHP_10035) | - | 2222343..2223539 (-) | 1197 | WP_027265081.1 | murein transglycosylase A | - |
| ACJEHP_RS10040 (ACJEHP_10040) | lpp1976 | 2223649..2224206 (-) | 558 | WP_011215959.1 | hypothetical protein | Machinery gene |
| ACJEHP_RS10045 (ACJEHP_10045) | lpp1977 | 2224203..2225009 (-) | 807 | WP_011215960.1 | PilW family protein | Machinery gene |
| ACJEHP_RS10050 (ACJEHP_10050) | lpp1978 | 2224948..2225262 (-) | 315 | WP_011215961.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| ACJEHP_RS10055 (ACJEHP_10055) | hisC | 2225422..2226531 (+) | 1110 | WP_011215962.1 | histidinol-phosphate transaminase | - |
| ACJEHP_RS10060 (ACJEHP_10060) | - | 2226568..2226909 (+) | 342 | WP_011215963.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| ACJEHP_RS10065 (ACJEHP_10065) | secF | 2227099..2228016 (-) | 918 | WP_011215964.1 | protein translocase subunit SecF | - |
| ACJEHP_RS10070 (ACJEHP_10070) | secD | 2228029..2229885 (-) | 1857 | WP_011215965.1 | protein translocase subunit SecD | - |
| ACJEHP_RS10075 (ACJEHP_10075) | yajC | 2229907..2230242 (-) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12327.37 Da Isoelectric Point: 8.4863
>NTDB_id=1076187 ACJEHP_RS10050 WP_011215961.1 2224948..2225262(-) (lpp1978) [Legionella pneumophila strain SPF588]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEAFYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRSYELDAN
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEAFYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRSYELDAN
Nucleotide
Download Length: 315 bp
>NTDB_id=1076187 ACJEHP_RS10050 WP_011215961.1 2224948..2225262(-) (lpp1978) [Legionella pneumophila strain SPF588]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTCG
ATGAAGCATTCTATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACATGGTTTAAAAAAAGCCAGTCCATTATTCGCTCCTATGAGCTGGATGCTAATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTCG
ATGAAGCATTCTATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACATGGTTTAAAAAAAGCCAGTCCATTATTCGCTCCTATGAGCTGGATGCTAATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
94.231 |
100 |
0.942 |
| lpp1978 | Legionella pneumophila str. Paris |
92.308 |
100 |
0.923 |