Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilZ   Type   Machinery gene
Locus tag   ACJEIB_RS06900 Genome accession   NZ_CP174236
Coordinates   1517575..1517916 (+) Length   113 a.a.
NCBI ID   WP_025519545.1    Uniprot ID   A0A128V7G5
Organism   Legionella pneumophila strain SPF589     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1512575..1522916
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJEIB_RS06875 (ACJEIB_06875) acpP 1513405..1513653 (+) 249 WP_003631752.1 acyl carrier protein -
  ACJEIB_RS06880 (ACJEIB_06880) fabF 1513672..1514910 (+) 1239 WP_011215413.1 beta-ketoacyl-ACP synthase II -
  ACJEIB_RS06885 (ACJEIB_06885) mltG 1514911..1515909 (+) 999 WP_011215414.1 endolytic transglycosylase MltG -
  ACJEIB_RS06890 (ACJEIB_06890) tmk 1515909..1516547 (+) 639 WP_011215415.1 dTMP kinase -
  ACJEIB_RS06895 (ACJEIB_06895) - 1516544..1517449 (+) 906 WP_011215416.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  ACJEIB_RS06900 (ACJEIB_06900) pilZ 1517575..1517916 (+) 342 WP_025519545.1 PilZ domain-containing protein Machinery gene
  ACJEIB_RS06905 (ACJEIB_06905) - 1517972..1518760 (+) 789 WP_011215418.1 TatD family hydrolase -
  ACJEIB_RS06910 (ACJEIB_06910) - 1518872..1519972 (+) 1101 WP_011215419.1 anhydro-N-acetylmuramic acid kinase -
  ACJEIB_RS06915 (ACJEIB_06915) - 1520028..1521320 (+) 1293 WP_070322037.1 MFS transporter -
  ACJEIB_RS06920 (ACJEIB_06920) - 1521395..1522675 (-) 1281 WP_408073444.1 MFS transporter -

Sequence


Protein


Download         Length: 113 a.a.        Molecular weight: 12521.54 Da        Isoelectric Point: 8.2421

>NTDB_id=1076130 ACJEIB_RS06900 WP_025519545.1 1517575..1517916(+) (pilZ) [Legionella pneumophila strain SPF589]
MTEKPQLINCSFPNEASLYMAYMPFVKGGGLFIRTQHVYSLGQSLELSVKLLNENEPYLVTGKIVWITPKGAQGNKPPGV
GIQFTGENSRYLCNKIETYLAGMLKSCQVTDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=1076130 ACJEIB_RS06900 WP_025519545.1 1517575..1517916(+) (pilZ) [Legionella pneumophila strain SPF589]
ATGACCGAAAAACCACAGCTTATAAATTGCTCATTTCCCAATGAAGCATCTTTGTACATGGCTTACATGCCTTTTGTGAA
AGGTGGCGGTCTTTTTATAAGAACTCAACACGTTTATTCTCTAGGGCAGTCGCTTGAATTATCTGTTAAATTGCTCAATG
AAAATGAACCATATTTGGTCACTGGTAAAATAGTCTGGATTACTCCTAAAGGTGCACAAGGCAATAAGCCGCCGGGAGTT
GGTATTCAATTTACCGGTGAAAACAGTCGTTATCTATGTAACAAGATAGAAACTTATTTGGCAGGAATGCTAAAATCATG
TCAGGTTACAGATACTATATAG

Domains


Predicted by InterproScan.

(8-101)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A128V7G5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

100

100

1

  pilZ Legionella pneumophila strain ERS1305867

100

100

1


Multiple sequence alignment