Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | ACJEIB_RS03810 | Genome accession | NZ_CP174236 |
| Coordinates | 799229..799936 (-) | Length | 235 a.a. |
| NCBI ID | WP_080020479.1 | Uniprot ID | - |
| Organism | Legionella pneumophila strain SPF589 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 794229..804936
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJEIB_RS03795 (ACJEIB_03795) | - | 797104..797616 (-) | 513 | WP_011214849.1 | pilus assembly protein | - |
| ACJEIB_RS03800 (ACJEIB_03800) | - | 797613..798680 (-) | 1068 | WP_011214850.1 | PilW family protein | - |
| ACJEIB_RS03805 (ACJEIB_03805) | pilV | 798677..799216 (-) | 540 | WP_011214851.1 | type IV pilus modification protein PilV | - |
| ACJEIB_RS03810 (ACJEIB_03810) | fimT | 799229..799936 (-) | 708 | WP_080020479.1 | GspH/FimT family pseudopilin | Machinery gene |
| ACJEIB_RS03815 (ACJEIB_03815) | - | 800164..801024 (-) | 861 | WP_011214853.1 | polysaccharide deacetylase family protein | - |
| ACJEIB_RS03820 (ACJEIB_03820) | - | 801201..802550 (-) | 1350 | WP_080020481.1 | lpg0634 family Dot/Icm T4SS effector | - |
| ACJEIB_RS03825 (ACJEIB_03825) | - | 802844..804325 (+) | 1482 | WP_011214855.1 | glycosyltransferase family 39 protein | - |
Sequence
Protein
Download Length: 235 a.a. Molecular weight: 24931.68 Da Isoelectric Point: 8.5054
>NTDB_id=1076121 ACJEIB_RS03810 WP_080020479.1 799229..799936(-) (fimT) [Legionella pneumophila strain SPF589]
MNKVITESQKFTLRNITNMLFCVKSSVLPAQSNIAQKIQKKGIIYNDLCKDGFDTEVPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWNNGALNCP
MNKVITESQKFTLRNITNMLFCVKSSVLPAQSNIAQKIQKKGIIYNDLCKDGFDTEVPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWNNGALNCP
Nucleotide
Download Length: 708 bp
>NTDB_id=1076121 ACJEIB_RS03810 WP_080020479.1 799229..799936(-) (fimT) [Legionella pneumophila strain SPF589]
TTGAACAAAGTGATAACGGAATCACAAAAGTTCACTCTGCGCAACATAACTAATATGTTATTTTGCGTTAAGAGTAGTGT
ATTGCCCGCACAATCTAATATAGCACAAAAGATACAAAAAAAAGGCATAATATACAATGATCTTTGTAAAGACGGCTTCG
ATACTGAGGTCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATCATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAACCGTTTGACTTCAAACATTGACTC
ACTGGTAAGTTCATTAAACTATGCGCGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTATGTCCATTAGGTTCGC
CAGGTTCAACGGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGGGCACCAACGCTT
TTAAAATCGCACCAGACTTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACGACCCAAAGCAACTTCACTATGTGTGATAACAGAGGCAATGCGTTTGCTCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCCGGAACAACACCCGGCCAGGCAGTCTGGAATAATGGAGCTCTGAACTGCCCTTAA
TTGAACAAAGTGATAACGGAATCACAAAAGTTCACTCTGCGCAACATAACTAATATGTTATTTTGCGTTAAGAGTAGTGT
ATTGCCCGCACAATCTAATATAGCACAAAAGATACAAAAAAAAGGCATAATATACAATGATCTTTGTAAAGACGGCTTCG
ATACTGAGGTCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATCATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAACCGTTTGACTTCAAACATTGACTC
ACTGGTAAGTTCATTAAACTATGCGCGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTATGTCCATTAGGTTCGC
CAGGTTCAACGGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGGGCACCAACGCTT
TTAAAATCGCACCAGACTTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACGACCCAAAGCAACTTCACTATGTGTGATAACAGAGGCAATGCGTTTGCTCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCCGGAACAACACCCGGCCAGGCAGTCTGGAATAATGGAGCTCTGAACTGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Legionella pneumophila strain Lp02 |
96.596 |
100 |
0.966 |