Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | ACJEH2_RS01980 | Genome accession | NZ_CP174235 |
| Coordinates | 450755..451069 (-) | Length | 104 a.a. |
| NCBI ID | WP_011215961.1 | Uniprot ID | Q5WV44 |
| Organism | Legionella pneumophila strain SPF590 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 445755..456069
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJEH2_RS01955 (ACJEH2_01955) | - | 446180..446680 (-) | 501 | WP_129904980.1 | hypothetical protein | - |
| ACJEH2_RS01960 (ACJEH2_01960) | - | 447172..448032 (+) | 861 | WP_181444925.1 | polysaccharide deacetylase family protein | - |
| ACJEH2_RS01965 (ACJEH2_01965) | - | 448150..449346 (-) | 1197 | WP_027265081.1 | murein transglycosylase A | - |
| ACJEH2_RS01970 (ACJEH2_01970) | lpp1976 | 449456..450013 (-) | 558 | WP_011215959.1 | hypothetical protein | Machinery gene |
| ACJEH2_RS01975 (ACJEH2_01975) | lpp1977 | 450010..450816 (-) | 807 | WP_011215960.1 | PilW family protein | Machinery gene |
| ACJEH2_RS01980 (ACJEH2_01980) | lpp1978 | 450755..451069 (-) | 315 | WP_011215961.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| ACJEH2_RS01985 (ACJEH2_01985) | hisC | 451229..452338 (+) | 1110 | WP_011215962.1 | histidinol-phosphate transaminase | - |
| ACJEH2_RS01990 (ACJEH2_01990) | - | 452375..452716 (+) | 342 | WP_011215963.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| ACJEH2_RS01995 (ACJEH2_01995) | secF | 452906..453823 (-) | 918 | WP_011215964.1 | protein translocase subunit SecF | - |
| ACJEH2_RS02000 (ACJEH2_02000) | secD | 453836..455692 (-) | 1857 | WP_011215965.1 | protein translocase subunit SecD | - |
| ACJEH2_RS02005 (ACJEH2_02005) | yajC | 455714..456049 (-) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12327.37 Da Isoelectric Point: 8.4863
>NTDB_id=1076083 ACJEH2_RS01980 WP_011215961.1 450755..451069(-) (lpp1978) [Legionella pneumophila strain SPF590]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEAFYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRSYELDAN
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEAFYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRSYELDAN
Nucleotide
Download Length: 315 bp
>NTDB_id=1076083 ACJEH2_RS01980 WP_011215961.1 450755..451069(-) (lpp1978) [Legionella pneumophila strain SPF590]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTCG
ATGAAGCATTCTATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACATGGTTTAAAAAAAGCCAGTCCATTATTCGCTCCTATGAGCTGGATGCTAATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTCG
ATGAAGCATTCTATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACATGGTTTAAAAAAAGCCAGTCCATTATTCGCTCCTATGAGCTGGATGCTAATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
94.231 |
100 |
0.942 |
| lpp1978 | Legionella pneumophila str. Paris |
92.308 |
100 |
0.923 |