Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | ACJEHN_RS09820 | Genome accession | NZ_CP174234 |
| Coordinates | 2199157..2199471 (-) | Length | 104 a.a. |
| NCBI ID | WP_010947713.1 | Uniprot ID | Q5ZU11 |
| Organism | Legionella pneumophila strain SPF600 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2194157..2204471
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJEHN_RS09795 (ACJEHN_09795) | - | 2194586..2195086 (-) | 501 | WP_015444348.1 | hypothetical protein | - |
| ACJEHN_RS09800 (ACJEHN_09800) | - | 2195578..2196438 (+) | 861 | WP_015444347.1 | polysaccharide deacetylase family protein | - |
| ACJEHN_RS09805 (ACJEHN_09805) | - | 2196555..2197748 (-) | 1194 | WP_010947710.1 | murein transglycosylase A | - |
| ACJEHN_RS09810 (ACJEHN_09810) | lpp1976 | 2197858..2198415 (-) | 558 | WP_010947711.1 | hypothetical protein | Machinery gene |
| ACJEHN_RS09815 (ACJEHN_09815) | lpp1977 | 2198412..2199218 (-) | 807 | WP_010947712.1 | PilW family protein | Machinery gene |
| ACJEHN_RS09820 (ACJEHN_09820) | lpp1978 | 2199157..2199471 (-) | 315 | WP_010947713.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| ACJEHN_RS09825 (ACJEHN_09825) | hisC | 2199631..2200740 (+) | 1110 | WP_015444344.1 | histidinol-phosphate transaminase | - |
| ACJEHN_RS09830 (ACJEHN_09830) | - | 2200777..2201118 (+) | 342 | WP_010947715.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| ACJEHN_RS09835 (ACJEHN_09835) | secF | 2201291..2202208 (-) | 918 | WP_010947716.1 | protein translocase subunit SecF | - |
| ACJEHN_RS09840 (ACJEHN_09840) | secD | 2202221..2204077 (-) | 1857 | WP_408069135.1 | protein translocase subunit SecD | - |
| ACJEHN_RS09845 (ACJEHN_09845) | yajC | 2204099..2204434 (-) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12330.42 Da Isoelectric Point: 9.4609
>NTDB_id=1076061 ACJEHN_RS09820 WP_010947713.1 2199157..2199471(-) (lpp1978) [Legionella pneumophila strain SPF600]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
Nucleotide
Download Length: 315 bp
>NTDB_id=1076061 ACJEHN_RS09820 WP_010947713.1 2199157..2199471(-) (lpp1978) [Legionella pneumophila strain SPF600]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
96.154 |
100 |
0.962 |
| lpp1978 | Legionella pneumophila str. Paris |
94.231 |
100 |
0.942 |