Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | ACJEHN_RS03130 | Genome accession | NZ_CP174234 |
| Coordinates | 667417..668124 (-) | Length | 235 a.a. |
| NCBI ID | WP_027266713.1 | Uniprot ID | - |
| Organism | Legionella pneumophila strain SPF600 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 662417..673124
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJEHN_RS03115 (ACJEHN_03115) | - | 665292..665804 (-) | 513 | WP_027266710.1 | pilus assembly protein | - |
| ACJEHN_RS03120 (ACJEHN_03120) | - | 665801..666868 (-) | 1068 | WP_047661655.1 | PilW family protein | - |
| ACJEHN_RS03125 (ACJEHN_03125) | pilV | 666865..667404 (-) | 540 | WP_047661657.1 | type IV pilus modification protein PilV | - |
| ACJEHN_RS03130 (ACJEHN_03130) | fimT | 667417..668124 (-) | 708 | WP_027266713.1 | GspH/FimT family pseudopilin | Machinery gene |
| ACJEHN_RS03135 (ACJEHN_03135) | - | 668346..669206 (-) | 861 | WP_011214853.1 | polysaccharide deacetylase family protein | - |
| ACJEHN_RS03140 (ACJEHN_03140) | - | 669383..670732 (-) | 1350 | WP_077338884.1 | lpg0634 family Dot/Icm T4SS effector | - |
| ACJEHN_RS03145 (ACJEHN_03145) | - | 671023..672504 (+) | 1482 | WP_047661659.1 | glycosyltransferase family 39 protein | - |
Sequence
Protein
Download Length: 235 a.a. Molecular weight: 24923.55 Da Isoelectric Point: 7.5607
>NTDB_id=1076037 ACJEHN_RS03130 WP_027266713.1 667417..668124(-) (fimT) [Legionella pneumophila strain SPF600]
MNKVITESQKFTPRNIANMLFCVDSSVLPAQSNIAQKIQTKGIMYNDLCKDSFDTEVPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGTPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWNNGALNCP
MNKVITESQKFTPRNIANMLFCVDSSVLPAQSNIAQKIQTKGIMYNDLCKDSFDTEVPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGTPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWNNGALNCP
Nucleotide
Download Length: 708 bp
>NTDB_id=1076037 ACJEHN_RS03130 WP_027266713.1 667417..668124(-) (fimT) [Legionella pneumophila strain SPF600]
TTGAACAAAGTGATAACGGAATCACAAAAATTCACTCCGCGCAACATAGCTAATATGTTATTTTGCGTTGATAGTAGTGT
ATTGCCCGCACAATCTAATATAGCACAAAAGATACAAACAAAAGGCATAATGTACAATGATCTTTGTAAAGACAGCTTCG
ATACTGAGGTCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTG
TTTGCCATCATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAACCGTTTGACTTCAAACATTGACTC
ACTGGTAAGCTCATTAAACTATGCGCGTGGAGTAGCACTTGATCGGGCAGTCAATGTGGCAGTATGTCCATTAGGTTCAC
CAGGTTCAACGGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGAACACCAACGCTT
TTAAAATCGCACCAGACTTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGATT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACAGAGGCAATGCGTTTGCCCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCCGGAACAACACCCGGCCAGGCAGTCTGGAATAATGGAGCTCTGAACTGCCCTTAA
TTGAACAAAGTGATAACGGAATCACAAAAATTCACTCCGCGCAACATAGCTAATATGTTATTTTGCGTTGATAGTAGTGT
ATTGCCCGCACAATCTAATATAGCACAAAAGATACAAACAAAAGGCATAATGTACAATGATCTTTGTAAAGACAGCTTCG
ATACTGAGGTCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTG
TTTGCCATCATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAACCGTTTGACTTCAAACATTGACTC
ACTGGTAAGCTCATTAAACTATGCGCGTGGAGTAGCACTTGATCGGGCAGTCAATGTGGCAGTATGTCCATTAGGTTCAC
CAGGTTCAACGGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGAACACCAACGCTT
TTAAAATCGCACCAGACTTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGATT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACAGAGGCAATGCGTTTGCCCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCCGGAACAACACCCGGCCAGGCAGTCTGGAATAATGGAGCTCTGAACTGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Legionella pneumophila strain Lp02 |
97.447 |
100 |
0.974 |