Detailed information NTG0107596

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: AABJ90_RS12925
• Genome accession: NZ_AP028964
• Coordinates: 2540220..2540498 (-)
• Length: 92 a.a.
• NCBI ID: WP_003244728.1
• Uniprot ID: A0A199WGU6
• Organism: Bacillus subtilis strain NA05 = NBRC 116153
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 2535220..2545498

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABJ90_RS12905 (BsubNA05_25020)	ade	2535284..2537017 (-)	1734	WP_131227380.1	adenine deaminase	-
AABJ90_RS12910 (BsubNA05_25030)	ktrC	2537173..2537838 (-)	666	WP_003222311.1	Ktr system potassium transporter KtrC	-
AABJ90_RS12915 (BsubNA05_25040)	ykqA	2537901..2538728 (-)	828	WP_095843668.1	gamma-glutamylcyclotransferase	-
AABJ90_RS12920 (BsubNA05_25050)	kinC	2538744..2540030 (-)	1287	WP_003232333.1	two-component sensor histidine kinase KinC	-
AABJ90_RS12925 (BsubNA05_25060)	abrB	2540220..2540498 (-)	279	WP_003244728.1	transcriptional regulator AbhA	Regulator
AABJ90_RS12930 (BsubNA05_25070)	mreBH	2540782..2541789 (+)	1008	WP_003245743.1	cell shape-determining protein MreBH	-
AABJ90_RS12935 (BsubNA05_25080)	ykpC	2541890..2542024 (+)	135	WP_003238865.1	protein YkpC	-
AABJ90_RS12940 (BsubNA05_25090)	ampS	2542133..2543365 (+)	1233	WP_338382010.1	aminopeptidase	-
AABJ90_RS12945 (BsubNA05_25100)	-	2543399..2544310 (-)	912	WP_338382011.1	ketopantoate reductase family protein	-

Sequence

Protein

• Length: 92 a.a.
• Molecular weight: 10256.07 Da
• Isoelectric Point: 5.8808

>NTDB_id=107596 AABJ90_RS12925 WP_003244728.1 2540220..2540498(-) (abrB) [Bacillus subtilis strain NA05 = NBRC 116153]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIILKKYKPHGVCLMTGEITSENKEYGNGKITLSPEGAQ
LLLEEIQAALKE

Nucleotide

• Length: 279 bp

>NTDB_id=107596 AABJ90_RS12925 WP_003244728.1 2540220..2540498(-) (abrB) [Bacillus subtilis strain NA05 = NBRC 116153]
ATGAAATCAATAGGTGTTGTGAGAAAAGTAGATGAATTAGGCCGCATTGTCATGCCGATTGAGTTGAGACGGGCATTGGA
TATTGCCATAAAAGACAGCATTGAGTTTTTTGTTGACGGAGATAAAATTATCTTGAAAAAGTACAAACCTCATGGCGTTT
GTTTAATGACTGGAGAAATCACTTCAGAAAATAAAGAATACGGCAACGGTAAAATTACGCTAAGCCCTGAGGGTGCACAG
CTGCTTCTCGAAGAAATTCAAGCCGCTTTAAAAGAATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (53-88)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-51)

3D structure

• AlphaFold DB: A0A199WGU6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	58.242	98.913	0.576