Detailed information    

insolico Bioinformatically predicted

Overview


Name   lqsT   Type   Regulator
Locus tag   ACJEH0_RS12950 Genome accession   NZ_CP174231
Coordinates   2879758..2881020 (-) Length   420 a.a.
NCBI ID   WP_010948208.1    Uniprot ID   Q5ZSL1
Organism   Legionella pneumophila strain SPF633     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 2874758..2886020
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJEH0_RS12935 (ACJEH0_12935) dupB 2874929..2876122 (+) 1194 WP_010948211.1 Dot/Icm T4SS effector deubiquitinase DupB/LaiF -
  ACJEH0_RS12940 (ACJEH0_12940) sdjA 2876193..2878616 (+) 2424 WP_010948210.1 Dot/Icm T4SS effector SdjA -
  ACJEH0_RS12945 (ACJEH0_12945) - 2879015..2879710 (+) 696 WP_010948209.1 iron-containing redox enzyme family protein -
  ACJEH0_RS12950 (ACJEH0_12950) lqsT 2879758..2881020 (-) 1263 WP_010948208.1 HAMP domain-containing sensor histidine kinase Regulator
  ACJEH0_RS12955 (ACJEH0_12955) mesI 2881417..2882304 (-) 888 WP_010948207.1 Dot/Icm T4SS metaeffector MesI -
  ACJEH0_RS12960 (ACJEH0_12960) ceg32 2882306..2885134 (-) 2829 WP_010948206.1 Dot/Icm T4SS effector Ceg32/SidI -
  ACJEH0_RS12965 (ACJEH0_12965) - 2885442..2885762 (+) 321 WP_010948205.1 hypothetical protein -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 48657.07 Da        Isoelectric Point: 7.9744

>NTDB_id=1075944 ACJEH0_RS12950 WP_010948208.1 2879758..2881020(-) (lqsT) [Legionella pneumophila strain SPF633]
MQRLKNIFTAIYQYLLKETEDASHQITLFGIVMMINYPLFGVFWKLEHFQLTEEFILRITAALLCACLAFNQFWPRQLLK
FLPVFWYIVLLFCLPYFFAYLTLINNGSTLWLMNCVSAIFFLLLVSSVLGALILLISGVGLAFFHFYILSNNQFVYIPGT
ISLFSLIVTFIAAIIIGALFARDREITYAGRLSGMRMLAGSIAHDLRTPLASIYLQAELQELIVERLNNPEVQKDLKENL
SKITRGIEMSNQLIRMQLNNIQRDKLDTSTFSIYSIKKLLKASLEEYPFKENQKSLIHLNDKNDFSIWIDEVGFKNMMWN
LLKNSLEYIEETHKGEISIWLEQGWEKENFNYLHIKDTAKGLNHKEYEKIFDFFYSGRKEGTGLGLAYCKLLMQAAGGDI
SCKGKKNEFAHFTLKFPKID

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=1075944 ACJEH0_RS12950 WP_010948208.1 2879758..2881020(-) (lqsT) [Legionella pneumophila strain SPF633]
ATGCAAAGGTTAAAAAATATATTTACTGCAATTTACCAATATTTATTAAAAGAAACTGAAGATGCAAGCCACCAAATCAC
TTTATTTGGCATCGTCATGATGATTAATTACCCTCTTTTCGGAGTTTTCTGGAAACTGGAGCATTTTCAACTGACAGAAG
AATTTATTTTACGCATCACTGCAGCCCTCCTCTGTGCCTGTTTGGCATTTAATCAATTTTGGCCAAGACAATTATTAAAA
TTTCTACCTGTTTTTTGGTATATAGTTCTTCTCTTTTGTTTGCCTTACTTTTTTGCTTATTTGACTCTCATAAACAATGG
CTCGACTCTTTGGCTAATGAATTGCGTATCCGCTATCTTTTTTCTTTTATTAGTTTCCAGTGTATTGGGGGCTCTTATAT
TACTTATATCAGGTGTTGGACTTGCTTTTTTTCATTTTTATATTTTATCAAATAATCAGTTTGTCTATATCCCAGGAACC
ATATCACTTTTTAGTTTAATTGTTACGTTTATTGCAGCAATAATCATTGGTGCCTTGTTTGCACGAGATAGAGAAATTAC
CTATGCCGGACGTTTATCGGGTATGCGCATGCTGGCTGGAAGTATCGCTCATGATTTAAGAACGCCGCTTGCCAGTATTT
ATTTACAAGCCGAATTACAGGAATTGATTGTCGAAAGATTAAATAATCCAGAAGTTCAAAAGGACCTGAAGGAAAATTTA
AGCAAAATTACTCGCGGCATAGAAATGAGTAATCAATTAATTCGTATGCAATTAAATAATATTCAACGAGACAAATTAGA
TACCAGTACATTTTCGATTTATTCCATCAAAAAATTGCTCAAGGCGTCTTTAGAAGAATACCCTTTCAAAGAAAATCAAA
AATCATTGATTCATTTAAATGATAAAAATGATTTTTCCATATGGATTGATGAAGTGGGTTTTAAAAATATGATGTGGAAT
TTGCTAAAAAATAGTCTGGAATATATTGAGGAAACCCATAAAGGCGAAATCTCTATCTGGCTAGAACAAGGATGGGAGAA
AGAGAATTTTAATTACCTCCATATAAAAGATACAGCTAAAGGTTTAAATCATAAAGAATATGAAAAAATATTTGATTTCT
TCTATTCTGGCAGAAAAGAAGGAACTGGTTTAGGCTTGGCCTATTGTAAACTTCTGATGCAAGCAGCAGGCGGTGATATT
TCCTGTAAAGGGAAAAAAAATGAATTCGCTCATTTCACTTTAAAATTCCCCAAAATTGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q5ZSL1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  lqsT Legionella pneumophila subsp. pneumophila str. Philadelphia 1

100

100

1


Multiple sequence alignment