Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | ACJEHI_RS07245 | Genome accession | NZ_CP174230 |
| Coordinates | 1642276..1642983 (+) | Length | 235 a.a. |
| NCBI ID | WP_027266713.1 | Uniprot ID | - |
| Organism | Legionella pneumophila strain SPF634 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1637276..1647983
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJEHI_RS07230 (ACJEHI_07230) | - | 1637896..1639377 (-) | 1482 | WP_047661659.1 | glycosyltransferase family 39 protein | - |
| ACJEHI_RS07235 (ACJEHI_07235) | - | 1639668..1641017 (+) | 1350 | WP_077338884.1 | lpg0634 family Dot/Icm T4SS effector | - |
| ACJEHI_RS07240 (ACJEHI_07240) | - | 1641194..1642054 (+) | 861 | WP_011214853.1 | polysaccharide deacetylase family protein | - |
| ACJEHI_RS07245 (ACJEHI_07245) | fimT | 1642276..1642983 (+) | 708 | WP_027266713.1 | GspH/FimT family pseudopilin | Machinery gene |
| ACJEHI_RS07250 (ACJEHI_07250) | pilV | 1642996..1643535 (+) | 540 | WP_047661657.1 | type IV pilus modification protein PilV | - |
| ACJEHI_RS07255 (ACJEHI_07255) | - | 1643532..1644599 (+) | 1068 | WP_047661655.1 | PilW family protein | - |
| ACJEHI_RS07260 (ACJEHI_07260) | - | 1644596..1645108 (+) | 513 | WP_027266710.1 | pilus assembly protein | - |
Sequence
Protein
Download Length: 235 a.a. Molecular weight: 24923.55 Da Isoelectric Point: 7.5607
>NTDB_id=1075889 ACJEHI_RS07245 WP_027266713.1 1642276..1642983(+) (fimT) [Legionella pneumophila strain SPF634]
MNKVITESQKFTPRNIANMLFCVDSSVLPAQSNIAQKIQTKGIMYNDLCKDSFDTEVPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGTPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWNNGALNCP
MNKVITESQKFTPRNIANMLFCVDSSVLPAQSNIAQKIQTKGIMYNDLCKDSFDTEVPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGTPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWNNGALNCP
Nucleotide
Download Length: 708 bp
>NTDB_id=1075889 ACJEHI_RS07245 WP_027266713.1 1642276..1642983(+) (fimT) [Legionella pneumophila strain SPF634]
TTGAACAAAGTGATAACGGAATCACAAAAATTCACTCCGCGCAACATAGCTAATATGTTATTTTGCGTTGATAGTAGTGT
ATTGCCCGCACAATCTAATATAGCACAAAAGATACAAACAAAAGGCATAATGTACAATGATCTTTGTAAAGACAGCTTCG
ATACTGAGGTCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTG
TTTGCCATCATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAACCGTTTGACTTCAAACATTGACTC
ACTGGTAAGCTCATTAAACTATGCGCGTGGAGTAGCACTTGATCGGGCAGTCAATGTGGCAGTATGTCCATTAGGTTCAC
CAGGTTCAACGGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGAACACCAACGCTT
TTAAAATCGCACCAGACTTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGATT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACAGAGGCAATGCGTTTGCCCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCCGGAACAACACCCGGCCAGGCAGTCTGGAATAATGGAGCTCTGAACTGCCCTTAA
TTGAACAAAGTGATAACGGAATCACAAAAATTCACTCCGCGCAACATAGCTAATATGTTATTTTGCGTTGATAGTAGTGT
ATTGCCCGCACAATCTAATATAGCACAAAAGATACAAACAAAAGGCATAATGTACAATGATCTTTGTAAAGACAGCTTCG
ATACTGAGGTCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTG
TTTGCCATCATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAACCGTTTGACTTCAAACATTGACTC
ACTGGTAAGCTCATTAAACTATGCGCGTGGAGTAGCACTTGATCGGGCAGTCAATGTGGCAGTATGTCCATTAGGTTCAC
CAGGTTCAACGGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGAACACCAACGCTT
TTAAAATCGCACCAGACTTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGATT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACAGAGGCAATGCGTTTGCCCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCCGGAACAACACCCGGCCAGGCAGTCTGGAATAATGGAGCTCTGAACTGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Legionella pneumophila strain Lp02 |
97.447 |
100 |
0.974 |