Detailed information NTG0107577

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: AABJ90_RS07990
• Genome accession: NZ_AP028964
• Coordinates: 1546951..1549281 (+)
• Length: 776 a.a.
• NCBI ID: WP_042976534.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain NA05 = NBRC 116153
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1541951..1554281

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABJ90_RS07950 (BsubNA05_15260)	yhbY	1542188..1542478 (+)	291	WP_003226133.1	ribosome assembly RNA-binding protein YhbY	-
AABJ90_RS07955 (BsubNA05_15270)	nadD	1542490..1543059 (+)	570	WP_338382602.1	nicotinate-nucleotide adenylyltransferase	-
AABJ90_RS07960 (BsubNA05_15280)	yqeK	1543049..1543609 (+)	561	WP_014480316.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
AABJ90_RS07965 (BsubNA05_15290)	rsfS	1543627..1543983 (+)	357	WP_041333759.1	ribosome silencing factor	-
AABJ90_RS07970 (BsubNA05_15300)	yqeM	1543980..1544723 (+)	744	WP_015714290.1	class I SAM-dependent methyltransferase	-
AABJ90_RS07975 (BsubNA05_15310)	comER	1544789..1545610 (-)	822	WP_014477389.1	late competence protein ComER	-
AABJ90_RS07980 (BsubNA05_15320)	comEA	1545694..1546311 (+)	618	WP_131227639.1	competence protein ComEA	Machinery gene
AABJ90_RS07985 (BsubNA05_15330)	comEB	1546378..1546947 (+)	570	WP_003229978.1	ComE operon protein 2	-
AABJ90_RS07990	comEC	1546951..1549281 (+)	2331	WP_042976534.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AABJ90_RS07995 (BsubNA05_15360)	yqzM	1549321..1549455 (-)	135	WP_003229983.1	YqzM family protein	-
AABJ90_RS08000	-	1549496..1549645 (+)	150	WP_003229985.1	hypothetical protein	-
AABJ90_RS08005 (BsubNA05_15370)	holA	1549685..1550728 (+)	1044	WP_014480310.1	DNA polymerase III subunit delta	-
AABJ90_RS08010 (BsubNA05_15380)	rpsT	1550743..1551009 (-)	267	WP_003229989.1	30S ribosomal protein S20	-
AABJ90_RS08015 (BsubNA05_15400)	gpr	1551213..1552319 (+)	1107	WP_014480309.1	GPR endopeptidase	-
AABJ90_RS08020 (BsubNA05_15410)	spoIIP	1552382..1553587 (+)	1206	WP_038429323.1	spore autolysin SpoIIP	-
AABJ90_RS08025 (BsubNA05_15420)	yqxA	1553604..1553942 (+)	339	WP_014477382.1	YqxA family protein	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86590.09 Da
• Isoelectric Point: 7.2640

>NTDB_id=107577 AABJ90_RS07990 WP_042976534.1 1546951..1549281(+) (comEC) [Bacillus subtilis strain NA05 = NBRC 116153]
MRNSRLLLPMAAASATAGITAAAYFPAIFLFILFLLIILIKTRHAFLIIVCFFSFILFFVLYAVTDSQNVSSYRQGTYQF
KAVIDTIPKIDGDRMSMMVKTPDKEKWAAAYRIQSAGEKEQLLYIEPGMSCELTGTLEEPNHATVPGAFDYNEYLYRQHI
HWNYSVTSIQNCSEPENFKYKVLSLRKHIISFTNSLLPPDSAGIVQALTVGDRFYVEDEVLTAYQKLGVVHLLAISGLHV
GILTAGLFYIIIRLGITREKASILLLLFLPLYVMLTGAAPSVLRAALMSGVYLAGSLVKWRVHSATAICLSYIVLLLFNP
YHLFEAGFQLSFAVSFSLILSSSIFHQVKTSLGQLTIVSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYTFCILPGA
VAGVLLLSLSASFGRLFFSWFDLLISWTNRLITNIADVDVFTIMIAHPAPVLLFLFTVTIILLLMAIEKRSLSQLMVTGG
ICCTVLFLLFIYPCLSSEGEVDMIDIGQGDSMFVGAPHQRGRVLIDTGGTLSYSSEPWREKQHPFSLGEKVLIPFLTAKG
IKQLDALILTHADQDHIGEAETLLKHHKVKRLVIPKGFVSEPKDEKVLQTAREEGVTIEEVKRGDVLQIKDLQFHVLSPG
APDPASKNNSSLVLWMETGGMSWILTGDLEKEGEQEVMDVFPNIKADVLKVGHHGSKGSTGEEFIQQLQPKTAIISAGKN
NRYHHPHQEVLQLLQRHSIRVLRTDQNGTIQYRYKNRVGTFSVYPPYDTSDITETN

Nucleotide

• Length: 2331 bp

>NTDB_id=107577 AABJ90_RS07990 WP_042976534.1 1546951..1549281(+) (comEC) [Bacillus subtilis strain NA05 = NBRC 116153]
ATGCGTAATTCGCGTTTGTTATTGCCTATGGCGGCAGCTTCGGCAACGGCTGGAATTACTGCCGCCGCTTATTTCCCCGC
TATTTTTCTTTTCATCCTCTTTCTCCTCATCATTTTAATCAAAACGAGGCACGCTTTTCTTATTATTGTTTGTTTCTTCT
CTTTTATATTGTTTTTTGTACTGTATGCAGTCACAGATTCTCAGAATGTCTCTTCCTATCGGCAGGGAACCTATCAGTTC
AAGGCGGTGATTGACACTATTCCCAAAATTGACGGCGACCGTATGTCTATGATGGTTAAGACACCTGATAAGGAAAAATG
GGCTGCTGCGTATCGCATTCAGTCTGCTGGTGAAAAAGAACAGCTGTTATACATAGAACCAGGAATGTCATGTGAGTTGA
CTGGTACATTGGAAGAACCGAATCACGCAACTGTGCCGGGTGCATTTGATTATAACGAGTATCTTTATCGGCAGCATATT
CATTGGAACTACTCTGTCACGTCTATCCAAAACTGCAGTGAACCTGAAAATTTTAAGTACAAGGTGCTCAGCTTGAGAAA
ACATATCATATCATTCACAAACAGCCTTCTGCCTCCTGATTCGGCAGGAATTGTACAGGCACTTACAGTCGGTGACAGAT
TTTATGTGGAGGACGAAGTGCTTACCGCGTATCAAAAGCTTGGTGTTGTCCATCTCTTGGCGATATCAGGACTCCACGTG
GGGATTTTGACAGCAGGTTTGTTTTATATCATAATCCGTCTTGGTATAACTAGAGAAAAGGCGTCAATTCTGTTGCTGTT
ATTTCTGCCGCTCTATGTGATGTTGACCGGCGCTGCTCCTTCAGTGCTACGCGCCGCTCTCATGTCGGGTGTTTACTTAG
CTGGAAGCCTTGTCAAATGGCGTGTCCACTCTGCAACTGCAATTTGTCTTTCATACATCGTCCTTCTGCTCTTCAATCCT
TATCATCTCTTTGAAGCCGGTTTTCAGCTATCGTTCGCCGTCAGTTTTTCTTTAATTCTATCCTCTTCTATTTTTCATCA
GGTTAAAACCTCCTTGGGGCAGTTGACAATTGTATCACTCATCGCTCAGCTGGGCTCGCTTCCGATTCTCCTGTATCATT
TTCATCAGTTTTCTATCATCAGCGTACCGATGAATATGTTGATGGTACCATTTTATACCTTCTGTATTTTGCCGGGAGCT
GTAGCAGGTGTTCTTCTATTAAGTCTTTCCGCTTCGTTTGGGAGATTGTTTTTCAGCTGGTTTGATTTATTGATAAGCTG
GACCAATAGGCTAATCACAAACATTGCAGATGTTGATGTGTTCACGATTATGATCGCACATCCTGCACCTGTTTTGCTTT
TTTTATTCACAGTCACGATCATCCTATTGCTTATGGCGATTGAAAAACGCTCCTTGTCGCAGTTGATGGTAACCGGAGGC
ATTTGCTGCACGGTGCTGTTTCTGCTCTTTATATATCCGTGTCTTAGTTCCGAAGGAGAAGTGGATATGATAGATATTGG
ACAGGGTGACAGCATGTTTGTAGGTGCTCCGCATCAGCGGGGGCGTGTCTTAATTGATACCGGCGGCACTTTGTCTTACT
CGTCAGAGCCTTGGCGCGAAAAACAGCATCCGTTTTCACTGGGGGAAAAGGTGCTGATTCCGTTTTTAACTGCTAAGGGA
ATCAAACAGCTTGACGCTTTAATTCTGACGCACGCTGACCAAGATCATATCGGAGAGGCGGAGACTCTGCTGAAGCATCA
TAAAGTAAAGCGCCTCGTGATTCCGAAAGGGTTCGTTTCTGAACCTAAAGATGAGAAAGTGCTGCAGACAGCCAGAGAAG
AGGGAGTGACAATTGAAGAGGTGAAGCGAGGCGATGTATTGCAAATAAAGGATTTGCAGTTCCATGTACTGTCACCTGGA
GCACCTGATCCGGCAAGCAAAAATAATTCCTCTCTCGTTCTGTGGATGGAGACGGGCGGTATGAGCTGGATCTTGACGGG
TGACCTGGAGAAAGAAGGGGAACAGGAGGTGATGGACGTGTTTCCAAATATTAAAGCAGATGTCTTAAAGGTGGGGCACC
ATGGGAGCAAAGGCTCTACCGGTGAAGAATTCATCCAACAGCTTCAGCCGAAAACGGCCATTATCTCAGCCGGGAAAAAC
AATCGGTACCATCATCCTCATCAAGAAGTTCTGCAACTATTACAGAGACATTCTATCCGCGTGCTGCGAACAGATCAAAA
CGGAACGATCCAATATAGATACAAAAACAGAGTTGGAACCTTTTCTGTCTATCCTCCATATGATACATCAGATATAACAG
AGACGAACTAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

• Domain of unknown function (DUF4131) (DUF4131) (20-170)

• Competence protein (Competence) (208-469)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	98.325	100	0.983