Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | ACJEHS_RS04425 | Genome accession | NZ_CP174225 |
| Coordinates | 1008386..1008700 (-) | Length | 104 a.a. |
| NCBI ID | WP_010947713.1 | Uniprot ID | Q5ZU11 |
| Organism | Legionella pneumophila strain SPF641 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1003386..1013700
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJEHS_RS04400 (ACJEHS_04400) | - | 1003815..1004315 (-) | 501 | WP_015444348.1 | hypothetical protein | - |
| ACJEHS_RS04405 (ACJEHS_04405) | - | 1004807..1005667 (+) | 861 | WP_015444347.1 | polysaccharide deacetylase family protein | - |
| ACJEHS_RS04410 (ACJEHS_04410) | - | 1005784..1006977 (-) | 1194 | WP_010947710.1 | murein transglycosylase A | - |
| ACJEHS_RS04415 (ACJEHS_04415) | lpp1976 | 1007087..1007644 (-) | 558 | WP_010947711.1 | hypothetical protein | Machinery gene |
| ACJEHS_RS04420 (ACJEHS_04420) | lpp1977 | 1007641..1008447 (-) | 807 | WP_010947712.1 | PilW family protein | Machinery gene |
| ACJEHS_RS04425 (ACJEHS_04425) | lpp1978 | 1008386..1008700 (-) | 315 | WP_010947713.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| ACJEHS_RS04430 (ACJEHS_04430) | hisC | 1008860..1009969 (+) | 1110 | WP_015444344.1 | histidinol-phosphate transaminase | - |
| ACJEHS_RS04435 (ACJEHS_04435) | - | 1010006..1010347 (+) | 342 | WP_010947715.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| ACJEHS_RS04440 (ACJEHS_04440) | secF | 1010520..1011437 (-) | 918 | WP_010947716.1 | protein translocase subunit SecF | - |
| ACJEHS_RS04445 (ACJEHS_04445) | secD | 1011450..1013306 (-) | 1857 | WP_010947717.1 | protein translocase subunit SecD | - |
| ACJEHS_RS04450 (ACJEHS_04450) | yajC | 1013328..1013663 (-) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12330.42 Da Isoelectric Point: 9.4609
>NTDB_id=1075671 ACJEHS_RS04425 WP_010947713.1 1008386..1008700(-) (lpp1978) [Legionella pneumophila strain SPF641]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
Nucleotide
Download Length: 315 bp
>NTDB_id=1075671 ACJEHS_RS04425 WP_010947713.1 1008386..1008700(-) (lpp1978) [Legionella pneumophila strain SPF641]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
96.154 |
100 |
0.962 |
| lpp1978 | Legionella pneumophila str. Paris |
94.231 |
100 |
0.942 |