Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | ACJEHR_RS09825 | Genome accession | NZ_CP174224 |
| Coordinates | 2205041..2205355 (-) | Length | 104 a.a. |
| NCBI ID | WP_010947713.1 | Uniprot ID | Q5ZU11 |
| Organism | Legionella pneumophila strain SPF642 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2200041..2210355
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJEHR_RS09800 (ACJEHR_09800) | - | 2200470..2200970 (-) | 501 | WP_015444348.1 | hypothetical protein | - |
| ACJEHR_RS09805 (ACJEHR_09805) | - | 2201462..2202322 (+) | 861 | WP_015444347.1 | polysaccharide deacetylase family protein | - |
| ACJEHR_RS09810 (ACJEHR_09810) | - | 2202439..2203632 (-) | 1194 | WP_010947710.1 | murein transglycosylase A | - |
| ACJEHR_RS09815 (ACJEHR_09815) | lpp1976 | 2203742..2204299 (-) | 558 | WP_010947711.1 | hypothetical protein | Machinery gene |
| ACJEHR_RS09820 (ACJEHR_09820) | lpp1977 | 2204296..2205102 (-) | 807 | WP_010947712.1 | PilW family protein | Machinery gene |
| ACJEHR_RS09825 (ACJEHR_09825) | lpp1978 | 2205041..2205355 (-) | 315 | WP_010947713.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| ACJEHR_RS09830 (ACJEHR_09830) | hisC | 2205515..2206624 (+) | 1110 | WP_015444344.1 | histidinol-phosphate transaminase | - |
| ACJEHR_RS09835 (ACJEHR_09835) | - | 2206661..2207002 (+) | 342 | WP_010947715.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| ACJEHR_RS09840 (ACJEHR_09840) | secF | 2207175..2208092 (-) | 918 | WP_010947716.1 | protein translocase subunit SecF | - |
| ACJEHR_RS09845 (ACJEHR_09845) | secD | 2208105..2209961 (-) | 1857 | WP_408081710.1 | protein translocase subunit SecD | - |
| ACJEHR_RS09850 (ACJEHR_09850) | yajC | 2209983..2210318 (-) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12330.42 Da Isoelectric Point: 9.4609
>NTDB_id=1075641 ACJEHR_RS09825 WP_010947713.1 2205041..2205355(-) (lpp1978) [Legionella pneumophila strain SPF642]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
Nucleotide
Download Length: 315 bp
>NTDB_id=1075641 ACJEHR_RS09825 WP_010947713.1 2205041..2205355(-) (lpp1978) [Legionella pneumophila strain SPF642]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
96.154 |
100 |
0.962 |
| lpp1978 | Legionella pneumophila str. Paris |
94.231 |
100 |
0.942 |