Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | ACJEHX_RS03125 | Genome accession | NZ_CP174220 |
| Coordinates | 667418..668125 (-) | Length | 235 a.a. |
| NCBI ID | WP_027266713.1 | Uniprot ID | - |
| Organism | Legionella pneumophila strain SPF647 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 662418..673125
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJEHX_RS03110 (ACJEHX_03110) | - | 665293..665805 (-) | 513 | WP_027266710.1 | pilus assembly protein | - |
| ACJEHX_RS03115 (ACJEHX_03115) | - | 665802..666869 (-) | 1068 | WP_047661655.1 | PilW family protein | - |
| ACJEHX_RS03120 (ACJEHX_03120) | pilV | 666866..667405 (-) | 540 | WP_047661657.1 | type IV pilus modification protein PilV | - |
| ACJEHX_RS03125 (ACJEHX_03125) | fimT | 667418..668125 (-) | 708 | WP_027266713.1 | GspH/FimT family pseudopilin | Machinery gene |
| ACJEHX_RS03130 (ACJEHX_03130) | - | 668347..669207 (-) | 861 | WP_011214853.1 | polysaccharide deacetylase family protein | - |
| ACJEHX_RS03135 (ACJEHX_03135) | - | 669384..670733 (-) | 1350 | WP_077338884.1 | lpg0634 family Dot/Icm T4SS effector | - |
| ACJEHX_RS03140 (ACJEHX_03140) | - | 671024..672505 (+) | 1482 | WP_047661659.1 | glycosyltransferase family 39 protein | - |
Sequence
Protein
Download Length: 235 a.a. Molecular weight: 24923.55 Da Isoelectric Point: 7.5607
>NTDB_id=1075449 ACJEHX_RS03125 WP_027266713.1 667418..668125(-) (fimT) [Legionella pneumophila strain SPF647]
MNKVITESQKFTPRNIANMLFCVDSSVLPAQSNIAQKIQTKGIMYNDLCKDSFDTEVPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGTPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWNNGALNCP
MNKVITESQKFTPRNIANMLFCVDSSVLPAQSNIAQKIQTKGIMYNDLCKDSFDTEVPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGTPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWNNGALNCP
Nucleotide
Download Length: 708 bp
>NTDB_id=1075449 ACJEHX_RS03125 WP_027266713.1 667418..668125(-) (fimT) [Legionella pneumophila strain SPF647]
TTGAACAAAGTGATAACGGAATCACAAAAATTCACTCCGCGCAACATAGCTAATATGTTATTTTGCGTTGATAGTAGTGT
ATTGCCCGCACAATCTAATATAGCACAAAAGATACAAACAAAAGGCATAATGTACAATGATCTTTGTAAAGACAGCTTCG
ATACTGAGGTCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTG
TTTGCCATCATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAACCGTTTGACTTCAAACATTGACTC
ACTGGTAAGCTCATTAAACTATGCGCGTGGAGTAGCACTTGATCGGGCAGTCAATGTGGCAGTATGTCCATTAGGTTCAC
CAGGTTCAACGGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGAACACCAACGCTT
TTAAAATCGCACCAGACTTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGATT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACAGAGGCAATGCGTTTGCCCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCCGGAACAACACCCGGCCAGGCAGTCTGGAATAATGGAGCTCTGAACTGCCCTTAA
TTGAACAAAGTGATAACGGAATCACAAAAATTCACTCCGCGCAACATAGCTAATATGTTATTTTGCGTTGATAGTAGTGT
ATTGCCCGCACAATCTAATATAGCACAAAAGATACAAACAAAAGGCATAATGTACAATGATCTTTGTAAAGACAGCTTCG
ATACTGAGGTCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTG
TTTGCCATCATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAACCGTTTGACTTCAAACATTGACTC
ACTGGTAAGCTCATTAAACTATGCGCGTGGAGTAGCACTTGATCGGGCAGTCAATGTGGCAGTATGTCCATTAGGTTCAC
CAGGTTCAACGGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGAACACCAACGCTT
TTAAAATCGCACCAGACTTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGATT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACAGAGGCAATGCGTTTGCCCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCCGGAACAACACCCGGCCAGGCAGTCTGGAATAATGGAGCTCTGAACTGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Legionella pneumophila strain Lp02 |
97.447 |
100 |
0.974 |