Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | ACJEIA_RS09825 | Genome accession | NZ_CP174215 |
| Coordinates | 2205311..2205625 (-) | Length | 104 a.a. |
| NCBI ID | WP_010947713.1 | Uniprot ID | Q5ZU11 |
| Organism | Legionella pneumophila strain SPF653 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2200311..2210625
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJEIA_RS09800 (ACJEIA_09800) | - | 2200740..2201240 (-) | 501 | WP_015444348.1 | hypothetical protein | - |
| ACJEIA_RS09805 (ACJEIA_09805) | - | 2201732..2202592 (+) | 861 | WP_015444347.1 | polysaccharide deacetylase family protein | - |
| ACJEIA_RS09810 (ACJEIA_09810) | - | 2202709..2203902 (-) | 1194 | WP_010947710.1 | murein transglycosylase A | - |
| ACJEIA_RS09815 (ACJEIA_09815) | lpp1976 | 2204012..2204569 (-) | 558 | WP_010947711.1 | hypothetical protein | Machinery gene |
| ACJEIA_RS09820 (ACJEIA_09820) | lpp1977 | 2204566..2205372 (-) | 807 | WP_010947712.1 | PilW family protein | Machinery gene |
| ACJEIA_RS09825 (ACJEIA_09825) | lpp1978 | 2205311..2205625 (-) | 315 | WP_010947713.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| ACJEIA_RS09830 (ACJEIA_09830) | hisC | 2205785..2206894 (+) | 1110 | WP_408072687.1 | histidinol-phosphate transaminase | - |
| ACJEIA_RS09835 (ACJEIA_09835) | - | 2206931..2207272 (+) | 342 | WP_010947715.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| ACJEIA_RS09840 (ACJEIA_09840) | secF | 2207445..2208362 (-) | 918 | WP_010947716.1 | protein translocase subunit SecF | - |
| ACJEIA_RS09845 (ACJEIA_09845) | secD | 2208375..2210231 (-) | 1857 | WP_010947717.1 | protein translocase subunit SecD | - |
| ACJEIA_RS09850 (ACJEIA_09850) | yajC | 2210253..2210588 (-) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12330.42 Da Isoelectric Point: 9.4609
>NTDB_id=1075263 ACJEIA_RS09825 WP_010947713.1 2205311..2205625(-) (lpp1978) [Legionella pneumophila strain SPF653]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
Nucleotide
Download Length: 315 bp
>NTDB_id=1075263 ACJEIA_RS09825 WP_010947713.1 2205311..2205625(-) (lpp1978) [Legionella pneumophila strain SPF653]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
96.154 |
100 |
0.962 |
| lpp1978 | Legionella pneumophila str. Paris |
94.231 |
100 |
0.942 |