Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ACJA24_RS07220 Genome accession   NZ_CP174198
Coordinates   1375321..1375917 (+) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus velezensis strain LQ-03     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1370321..1380917
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJA24_RS07190 - 1370535..1370990 (+) 456 WP_044053160.1 flavodoxin -
  ACJA24_RS07195 dapD 1371072..1371782 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  ACJA24_RS07200 - 1371853..1372977 (+) 1125 WP_014304923.1 N-acetyldiaminopimelate deacetylase -
  ACJA24_RS07205 - 1373038..1373283 (+) 246 WP_003154596.1 YkuS family protein -
  ACJA24_RS07210 - 1373317..1374123 (-) 807 WP_003154595.1 mechanosensitive ion channel family protein -
  ACJA24_RS07215 - 1374411..1374869 (+) 459 WP_014304924.1 TlpA disulfide reductase family protein -
  ACJA24_RS07220 rok 1375321..1375917 (+) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  ACJA24_RS07225 - 1375938..1376930 (-) 993 WP_014304925.1 hypothetical protein -
  ACJA24_RS07230 - 1377076..1377678 (+) 603 WP_003154587.1 molybdenum cofactor guanylyltransferase -
  ACJA24_RS07235 - 1377730..1378749 (+) 1020 WP_003154586.1 molybdopterin-synthase adenylyltransferase MoeB -
  ACJA24_RS07240 glp 1378767..1380059 (+) 1293 WP_014304926.1 gephyrin-like molybdotransferase Glp -
  ACJA24_RS07245 mobB 1380020..1380541 (+) 522 WP_041481858.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=1074907 ACJA24_RS07220 WP_003154591.1 1375321..1375917(+) (rok) [Bacillus velezensis strain LQ-03]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1074907 ACJA24_RS07220 WP_003154591.1 1375321..1375917(+) (rok) [Bacillus velezensis strain LQ-03]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACGGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCGCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843

Multiple sequence alignment