Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ACCO34_RS07490 Genome accession   NZ_CP174160
Coordinates   1405375..1405971 (+) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus velezensis strain SMT-24     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1400375..1410971
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACCO34_RS07460 - 1400589..1401044 (+) 456 WP_003154599.1 flavodoxin -
  ACCO34_RS07465 dapD 1401126..1401836 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  ACCO34_RS07470 - 1401907..1403031 (+) 1125 WP_014304923.1 N-acetyldiaminopimelate deacetylase -
  ACCO34_RS07475 - 1403092..1403337 (+) 246 WP_139890271.1 YkuS family protein -
  ACCO34_RS07480 - 1403371..1404177 (-) 807 WP_003154595.1 mechanosensitive ion channel family protein -
  ACCO34_RS07485 - 1404465..1404923 (+) 459 WP_024085241.1 TlpA disulfide reductase family protein -
  ACCO34_RS07490 rok 1405375..1405971 (+) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  ACCO34_RS07495 - 1405992..1406984 (-) 993 WP_139890270.1 sporulation protein -
  ACCO34_RS07500 - 1407130..1407732 (+) 603 WP_003154587.1 molybdenum cofactor guanylyltransferase -
  ACCO34_RS07505 - 1407784..1408803 (+) 1020 WP_003154586.1 molybdopterin-synthase adenylyltransferase MoeB -
  ACCO34_RS07510 glp 1408821..1410113 (+) 1293 WP_139890269.1 gephyrin-like molybdotransferase Glp -
  ACCO34_RS07515 mobB 1410074..1410595 (+) 522 WP_015388301.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=1074747 ACCO34_RS07490 WP_003154591.1 1405375..1405971(+) (rok) [Bacillus velezensis strain SMT-24]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1074747 ACCO34_RS07490 WP_003154591.1 1405375..1405971(+) (rok) [Bacillus velezensis strain SMT-24]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACGGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCGCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843

Multiple sequence alignment