Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ACCO34_RS07390 Genome accession   NZ_CP174160
Coordinates   1389497..1389961 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain SMT-24     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1384497..1394961
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACCO34_RS07370 - 1384977..1386797 (+) 1821 WP_003154628.1 PAS domain-containing protein -
  ACCO34_RS07375 - 1386773..1387992 (-) 1220 Protein_1394 aminotransferase A -
  ACCO34_RS07380 - 1388193..1388354 (-) 162 WP_007409608.1 hypothetical protein -
  ACCO34_RS07385 cheV 1388543..1389454 (+) 912 WP_014304917.1 chemotaxis protein CheV -
  ACCO34_RS07390 kre 1389497..1389961 (-) 465 WP_003154622.1 YkyB family protein Regulator
  ACCO34_RS07395 - 1390084..1391376 (-) 1293 WP_043867050.1 MFS transporter -
  ACCO34_RS07400 - 1391452..1391946 (-) 495 WP_088037173.1 L,D-transpeptidase family protein -
  ACCO34_RS07405 - 1392021..1392884 (-) 864 WP_139890273.1 metallophosphoesterase -
  ACCO34_RS07410 fadH 1393028..1393792 (+) 765 WP_139890272.1 2,4-dienoyl-CoA reductase -
  ACCO34_RS07415 - 1393903..1394451 (+) 549 Protein_1402 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=1074746 ACCO34_RS07390 WP_003154622.1 1389497..1389961(-) (kre) [Bacillus velezensis strain SMT-24]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1074746 ACCO34_RS07390 WP_003154622.1 1389497..1389961(-) (kre) [Bacillus velezensis strain SMT-24]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment