Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACCH06_RS04640 Genome accession   NZ_CP174157
Coordinates   971303..972094 (+) Length   263 a.a.
NCBI ID   WP_004430590.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain SHZ-24     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 966303..977094
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACCH06_RS04610 - 967147..968160 (+) 1014 WP_406590161.1 FecCD family ABC transporter permease -
  ACCH06_RS04615 - 968277..969158 (+) 882 WP_406589794.1 PhzF family phenazine biosynthesis isomerase -
  ACCH06_RS04620 - 969239..969823 (+) 585 WP_061573406.1 nitroreductase -
  ACCH06_RS04625 - 969863..970054 (-) 192 WP_004430587.1 YfhD family protein -
  ACCH06_RS04630 - 970132..970242 (-) 111 WP_003223230.1 YfhE family protein -
  ACCH06_RS04635 - 970301..971212 (-) 912 WP_258728850.1 TIGR01777 family oxidoreductase -
  ACCH06_RS04640 recX 971303..972094 (+) 792 WP_004430590.1 recombination regulator RecX Regulator
  ACCH06_RS04645 - 972102..972428 (+) 327 WP_010788005.1 YfhH family protein -
  ACCH06_RS04650 - 972608..973756 (+) 1149 WP_406590162.1 MFS transporter -
  ACCH06_RS04655 - 973797..973949 (-) 153 WP_004430596.1 small, acid-soluble spore protein K -
  ACCH06_RS04660 - 974066..974335 (+) 270 WP_004430597.1 YfhJ family protein -
  ACCH06_RS04665 - 974463..974999 (+) 537 WP_010788007.1 SH3 domain-containing protein -
  ACCH06_RS04670 - 975141..975488 (+) 348 WP_010788008.1 SdpI family protein -
  ACCH06_RS04675 - 975475..976341 (+) 867 WP_406589795.1 alpha/beta fold hydrolase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30952.20 Da        Isoelectric Point: 7.4549

>NTDB_id=1074649 ACCH06_RS04640 WP_004430590.1 971303..972094(+) (recX) [Bacillus atrophaeus strain SHZ-24]
MPFITKITTQKKTTERFNIFLDNKYAFSVDADVLVKFDLKKGKELDDLDIVEIQYGDEVKKGFNRALEFLSYRMRSTKEV
TDHLKKKEISDPAITEIIHKLNDYRYLNDKEFAEAYASTHKKTNGKGPDVLYKELRSKGIDDDTIKETLSTFSFEEQTEE
ALKHIGKILKKEKKLSTKEIKQRAQMLLQRKGFSFDVITAALEQTEYANDEDTEREALRQHAEKALRKYRYDGSYESKMK
VKQYLFRKGFSLDMIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=1074649 ACCH06_RS04640 WP_004430590.1 971303..972094(+) (recX) [Bacillus atrophaeus strain SHZ-24]
ATGCCGTTTATCACGAAAATCACAACGCAGAAAAAAACGACCGAGCGCTTTAACATTTTTCTCGATAATAAATATGCTTT
CAGTGTGGATGCGGACGTACTCGTGAAATTCGACCTGAAAAAAGGAAAAGAACTCGATGACCTTGATATCGTTGAGATTC
AATACGGGGATGAAGTAAAGAAAGGCTTTAACCGGGCGCTTGAATTTTTATCATACCGGATGCGCTCAACAAAAGAGGTA
ACGGATCATTTAAAAAAGAAAGAAATATCTGATCCAGCTATTACAGAAATCATCCATAAGCTGAATGATTATCGTTATCT
GAATGATAAGGAGTTCGCAGAAGCTTATGCGAGCACACATAAGAAAACAAATGGAAAGGGACCGGACGTTCTTTATAAAG
AGTTAAGGTCAAAGGGGATCGACGATGATACGATCAAAGAGACACTGAGCACATTTTCTTTTGAGGAACAGACAGAGGAG
GCGCTGAAGCATATTGGAAAAATCCTAAAAAAAGAAAAAAAACTCTCTACAAAAGAAATCAAGCAGCGAGCGCAAATGCT
TCTGCAGCGAAAGGGCTTCTCCTTCGACGTCATCACAGCGGCGCTTGAGCAGACCGAGTATGCAAACGATGAAGATACAG
AAAGGGAAGCGTTACGGCAGCACGCTGAAAAGGCGCTAAGAAAATACCGATATGACGGCTCCTACGAGAGCAAGATGAAG
GTAAAACAATATTTATTCAGAAAAGGATTCTCACTGGATATGATTGACCAATTTCTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

82.89

100

0.829

Multiple sequence alignment