Detailed information NTG1074590

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: ACJED3_RS11260
• Genome accession: NZ_CP174155
• Coordinates: 2108471..2109847 (-)
• Length: 458 a.a.
• NCBI ID: WP_014475593.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain G01
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2103471..2114847

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJED3_RS11240	ispF	2104987..2105463 (-)	477	WP_003225745.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	-
ACJED3_RS11245	ispD	2105456..2106154 (-)	699	WP_014478616.1	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	-
ACJED3_RS11250	yacL	2106169..2107269 (-)	1101	WP_003235014.1	PIN/TRAM domain-containing protein	-
ACJED3_RS11255	disA	2107385..2108467 (-)	1083	WP_003225736.1	DNA integrity scanning diadenylate cyclase DisA	-
ACJED3_RS11260	radA	2108471..2109847 (-)	1377	WP_014475593.1	DNA repair protein RadA	Machinery gene
ACJED3_RS11265	clpC	2109939..2112371 (-)	2433	WP_014475592.1	ATP-dependent protease ATP-binding subunit ClpC	Regulator
ACJED3_RS11270	mcsB	2112368..2113459 (-)	1092	WP_003235007.1	protein arginine kinase	-
ACJED3_RS11275	mcsA	2113459..2114016 (-)	558	WP_015252993.1	protein-arginine kinase activator protein McsA	-
ACJED3_RS11280	ctsR	2114030..2114494 (-)	465	WP_003225724.1	transcriptional regulator CtsR	-

Sequence

Protein

• Length: 458 a.a.
• Molecular weight: 49466.99 Da
• Isoelectric Point: 8.2399

>NTDB_id=1074590 ACJED3_RS11260 WP_014475593.1 2108471..2109847(-) (radA) [Bacillus subtilis strain G01]
MAKTKSKFICQSCGYESPKWMGKCPGCGAWNTMVEEMIKKAPANRRAAFSHSVQTVQKPSPITSIETSEEPRVKTQLGEF
NRVLGGGVVKGSLVLIGGDPGIGKSTLLLQVSAQLSGSSNSVLYISGEESVKQTKLRADRLGINNPSLHVLSETDMEYIS
SAIQEMNPAFVVVDSIQTVYQSDITSAPGSVSQVRECTAELMKIAKTKGIPIFIVGHVTKEGSIAGPRLLEHMVDTVLYF
EGERHHTFRILRAVKNRFGSTNEMGIFEMREEGLTEVLNPSEIFLEERSAGSAGSSITASMEGTRPILVEIQALISPTSF
GNPRRMATGIDHNRVSLLMAVLEKRVGLLLQNQDAYLKVAGGVKLDEPAIDLAIVISIASSFRDTPPNPADCFIGEVGLT
GEVRRVSRIEQRVKEAAKLGFKRMIIPAANLDGWTKPKGIEVIGVANVAEALRTSLGG

Nucleotide

• Length: 1377 bp

>NTDB_id=1074590 ACJED3_RS11260 WP_014475593.1 2108471..2109847(-) (radA) [Bacillus subtilis strain G01]
ATGGCTAAAACAAAATCGAAATTCATCTGCCAATCCTGCGGCTACGAGTCTCCAAAATGGATGGGGAAATGTCCGGGCTG
CGGTGCTTGGAATACAATGGTGGAAGAAATGATTAAAAAAGCACCGGCCAATCGGAGAGCGGCTTTTTCTCATTCTGTTC
AAACTGTACAGAAACCTTCACCTATTACATCAATCGAAACATCAGAAGAACCCCGCGTCAAAACCCAGCTTGGCGAGTTT
AACAGAGTACTCGGCGGAGGTGTCGTTAAAGGCTCCCTCGTTTTAATTGGCGGTGATCCTGGTATCGGAAAGTCAACGCT
ATTACTGCAGGTTTCCGCTCAATTATCAGGCTCATCAAACAGTGTCCTGTATATTTCGGGAGAAGAATCTGTAAAGCAAA
CGAAGCTGCGAGCAGACCGTCTGGGCATTAATAATCCGTCACTGCATGTTTTATCTGAAACCGATATGGAGTATATTTCG
TCTGCTATACAAGAGATGAATCCAGCGTTTGTCGTTGTTGACTCTATTCAAACGGTTTACCAAAGCGATATTACATCGGC
TCCAGGCAGTGTGTCACAGGTCAGAGAATGTACTGCTGAGCTGATGAAAATCGCAAAAACAAAAGGTATTCCGATTTTTA
TCGTAGGGCACGTGACGAAAGAAGGGTCTATTGCAGGTCCGAGACTGTTGGAGCATATGGTTGACACTGTTTTATATTTT
GAAGGAGAACGCCACCATACTTTCCGTATTTTGCGGGCTGTAAAAAACCGTTTCGGATCTACAAACGAAATGGGCATTTT
CGAAATGCGGGAAGAGGGGCTCACTGAGGTTTTGAATCCTTCGGAAATTTTCTTAGAAGAACGCTCTGCTGGTTCCGCAG
GCTCGAGTATCACTGCCTCTATGGAGGGCACTAGACCGATTCTCGTTGAAATTCAGGCGCTCATCTCGCCAACAAGCTTT
GGCAACCCAAGGCGTATGGCAACGGGAATAGACCATAACAGGGTTTCTCTGTTAATGGCTGTGTTAGAAAAAAGAGTTGG
ACTGCTGCTGCAAAATCAGGATGCTTATTTGAAAGTGGCTGGCGGCGTTAAGCTTGATGAACCGGCAATTGATCTTGCGA
TTGTGATTAGTATCGCATCAAGCTTTAGAGACACACCTCCAAATCCTGCAGATTGTTTTATTGGAGAAGTGGGATTAACC
GGAGAAGTCCGGCGGGTTTCAAGAATTGAACAGCGTGTGAAAGAAGCGGCAAAGCTTGGCTTTAAACGCATGATCATACC
CGCGGCAAATCTGGACGGATGGACAAAACCAAAAGGGATTGAGGTTATCGGAGTAGCAAATGTTGCAGAAGCGCTTCGTA
CTTCATTAGGAGGATAA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (365-430)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (8-35)

• AAA domain (AAA_25) (72-222)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	99.782	100	0.998
radA	Streptococcus pneumoniae Rx1	63.135	98.908	0.624
radA	Streptococcus pneumoniae D39	63.135	98.908	0.624
radA	Streptococcus pneumoniae R6	63.135	98.908	0.624
radA	Streptococcus pneumoniae TIGR4	63.135	98.908	0.624
radA	Streptococcus mitis NCTC 12261	63.135	98.908	0.624
radA	Streptococcus mitis SK321	62.914	98.908	0.622