Detailed information    

insolico Bioinformatically predicted

Overview


Name   nin/comJ   Type   Regulator
Locus tag   ACJED3_RS09880 Genome accession   NZ_CP174155
Coordinates   1847194..1847592 (+) Length   132 a.a.
NCBI ID   WP_014478800.1    Uniprot ID   A0A0D1L5A4
Organism   Bacillus subtilis strain G01     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context


Location: 1842194..1852592
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJED3_RS09855 hxlR 1842932..1843294 (-) 363 WP_003246265.1 transcriptional activator HxlR -
  ACJED3_RS09860 hxlA 1843523..1844155 (+) 633 WP_014478804.1 3-hexulose-6-phosphate synthase -
  ACJED3_RS09865 hxlB 1844161..1844718 (+) 558 WP_014478803.1 6-phospho-3-hexuloisomerase -
  ACJED3_RS09870 tlpC 1844829..1846550 (+) 1722 Protein_1935 methyl-accepting chemotaxis protein TlpC -
  ACJED3_RS09875 nucA/comI 1846718..1847167 (+) 450 WP_014475770.1 DNA-entry nuclease Machinery gene
  ACJED3_RS09880 nin/comJ 1847194..1847592 (+) 399 WP_014478800.1 DNA-entry nuclease inhibitor Regulator
  ACJED3_RS09885 bglC 1847629..1849062 (-) 1434 WP_014478799.1 6-phospho-beta-glucosidase -
  ACJED3_RS09890 - 1849135..1849879 (-) 745 Protein_1939 AAA family ATPase -
  ACJED3_RS09895 - 1849898..1850218 (-) 321 WP_014478796.1 DUF3147 family protein -
  ACJED3_RS09900 - 1850206..1850628 (-) 423 WP_014478795.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACJED3_RS09905 yckD 1850756..1851088 (-) 333 WP_014478794.1 YckD family protein -
  ACJED3_RS09910 yckC 1851170..1851625 (-) 456 WP_014478793.1 RDD family protein -
  ACJED3_RS09915 - 1851645..1851842 (-) 198 WP_121509395.1 hypothetical protein -

Sequence


Protein


Download         Length: 132 a.a.        Molecular weight: 15006.98 Da        Isoelectric Point: 4.8991

>NTDB_id=1074588 ACJED3_RS09880 WP_014478800.1 1847194..1847592(+) (nin/comJ) [Bacillus subtilis strain G01]
MIKSWKPQELSISYHQFTVFQKDSTPPIMDWTDEAIEKGYTAADGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1074588 ACJED3_RS09880 WP_014478800.1 1847194..1847592(+) (nin/comJ) [Bacillus subtilis strain G01]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TATAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATACTGCGGCAGACGGAGCCATTTCATTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATTATGTCTAAGAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains


Predicted by InterproScan.

(9-129)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1L5A4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

97.727

100

0.977


Multiple sequence alignment