Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACJED3_RS07195 Genome accession   NZ_CP174155
Coordinates   1306229..1307023 (-) Length   264 a.a.
NCBI ID   WP_014479217.1    Uniprot ID   -
Organism   Bacillus subtilis strain G01     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1301229..1312023
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJED3_RS07160 ephM 1302072..1302932 (-) 861 WP_014479220.1 epoxide hydrolase EphM -
  ACJED3_RS07165 spdL 1302919..1303251 (-) 333 WP_014479219.1 SdpC immunity protein SpdL -
  ACJED3_RS07170 yfhK 1303336..1303854 (-) 519 WP_014479218.1 SH3 domain-containing protein -
  ACJED3_RS07175 yfhJ 1303999..1304268 (-) 270 WP_003243789.1 YfhJ family protein -
  ACJED3_RS07180 sspK 1304393..1304545 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  ACJED3_RS07185 yfhI 1304577..1305770 (-) 1194 WP_003243500.1 MFS transporter -
  ACJED3_RS07190 yfhH 1305913..1306227 (-) 315 WP_003244592.1 YfhH family protein -
  ACJED3_RS07195 recX 1306229..1307023 (-) 795 WP_014479217.1 recombination regulator RecX Regulator
  ACJED3_RS07200 yfhF 1307112..1308023 (+) 912 WP_014479216.1 TIGR01777 family oxidoreductase -
  ACJED3_RS07205 yfhE 1308078..1308188 (+) 111 WP_003223230.1 YfhE family protein -
  ACJED3_RS07210 yfhD 1308254..1308445 (+) 192 WP_014479215.1 YfhD family protein -
  ACJED3_RS07215 yfhC 1308484..1309068 (-) 585 WP_033881364.1 nitroreductase -
  ACJED3_RS07220 yfhB 1309156..1310037 (-) 882 WP_014479213.1 PhzF family phenazine biosynthesis isomerase -
  ACJED3_RS07225 sxzA 1310152..1311183 (-) 1032 WP_003233568.1 iron chelate uptake ABC transporter family permease subunit -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.21 Da        Isoelectric Point: 6.6686

>NTDB_id=1074582 ACJED3_RS07195 WP_014479217.1 1306229..1307023(-) (recX) [Bacillus subtilis strain G01]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=1074582 ACJED3_RS07195 WP_014479217.1 1306229..1307023(-) (recX) [Bacillus subtilis strain G01]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATTAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992

Multiple sequence alignment