Detailed information NTG0107451

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: AABA74_RS17055
• Genome accession: NZ_AP028932
• Coordinates: 3427614..3428777 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain RB.IBE29
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3422614..3433777

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABA74_RS17025 (RBIBE_32900)	-	3422879..3423298 (-)	420	WP_058906393.1	TIGR03826 family flagellar region protein	-
AABA74_RS17030 (RBIBE_32910)	comFC	3423372..3424061 (-)	690	WP_196479391.1	ComF family protein	Machinery gene
AABA74_RS17035 (RBIBE_32920)	-	3424067..3424351 (-)	285	WP_003151389.1	competence protein ComFB	-
AABA74_RS17040 (RBIBE_32930)	comFA	3424409..3425794 (-)	1386	WP_058906395.1	DEAD/DEAH box helicase	Machinery gene
AABA74_RS17045 (RBIBE_32940)	-	3425902..3426750 (-)	849	WP_058906396.1	DegV family protein	-
AABA74_RS17050 (RBIBE_32950)	degU	3426848..3427537 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
AABA74_RS17055 (RBIBE_32960)	degS	3427614..3428777 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
AABA74_RS17060 (RBIBE_32970)	-	3429000..3429647 (+)	648	WP_003151384.1	YigZ family protein	-
AABA74_RS17065 (RBIBE_32980)	-	3429652..3430866 (+)	1215	WP_003151383.1	LCP family protein	-
AABA74_RS17070 (RBIBE_32990)	-	3430956..3432032 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
AABA74_RS17075 (RBIBE_33000)	-	3432165..3433361 (-)	1197	WP_058906397.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=107451 AABA74_RS17055 WP_003151385.1 3427614..3428777(-) (degS) [Bacillus velezensis strain RB.IBE29]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=107451 AABA74_RS17055 WP_003151385.1 3427614..3428777(-) (degS) [Bacillus velezensis strain RB.IBE29]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTGAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGACGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948