Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | ACI8NS_RS16005 | Genome accession | NZ_CP174125 |
| Coordinates | 3241909..3242199 (+) | Length | 96 a.a. |
| NCBI ID | WP_169510469.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain AX22 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3236909..3247199
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACI8NS_RS15990 (ACI8NS_15990) | - | 3237130..3238455 (-) | 1326 | WP_087920785.1 | G5 and 3D domain-containing protein | - |
| ACI8NS_RS15995 (ACI8NS_15995) | - | 3238590..3239357 (-) | 768 | WP_032872179.1 | TatD family hydrolase | - |
| ACI8NS_RS16000 (ACI8NS_16000) | metG | 3239434..3241425 (-) | 1992 | WP_022552471.1 | methionine--tRNA ligase | - |
| ACI8NS_RS16005 (ACI8NS_16005) | abrB | 3241909..3242199 (+) | 291 | WP_169510469.1 | transition state genes transcriptional regulator AbrB | Regulator |
| ACI8NS_RS16010 (ACI8NS_16010) | rsmI | 3242249..3243130 (-) | 882 | WP_032872176.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| ACI8NS_RS16015 (ACI8NS_16015) | - | 3243105..3243404 (-) | 300 | WP_007409921.1 | GIY-YIG nuclease family protein | - |
| ACI8NS_RS16020 (ACI8NS_16020) | - | 3243391..3244134 (-) | 744 | WP_004264717.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| ACI8NS_RS16025 (ACI8NS_16025) | yabA | 3244195..3244554 (-) | 360 | WP_004264720.1 | replication initiation-control protein YabA | - |
| ACI8NS_RS16030 (ACI8NS_16030) | ricT | 3244569..3245396 (-) | 828 | WP_004264723.1 | competence/sporulation regulator complex protein RicT | - |
| ACI8NS_RS16035 (ACI8NS_16035) | holB | 3245399..3246388 (-) | 990 | WP_032872173.1 | DNA polymerase III subunit delta' | - |
| ACI8NS_RS16040 (ACI8NS_16040) | - | 3246400..3246840 (-) | 441 | WP_004264730.1 | YaaR family protein | - |
| ACI8NS_RS16045 (ACI8NS_16045) | darA | 3246853..3247182 (-) | 330 | WP_004264734.1 | cyclic di-AMP receptor DarA | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10753.57 Da Isoelectric Point: 6.3482
>NTDB_id=1074492 ACI8NS_RS16005 WP_169510469.1 3241909..3242199(+) (abrB) [Bacillus velezensis strain AX22]
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK
Nucleotide
Download Length: 291 bp
>NTDB_id=1074492 ACI8NS_RS16005 WP_169510469.1 3241909..3242199(+) (abrB) [Bacillus velezensis strain AX22]
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTTGGACGCGTAGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATCATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTTGGACGCGTAGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATCATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
97.917 |
100 |
0.979 |