Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACI703_RS05005 Genome accession   NZ_CP173765
Coordinates   1136117..1136518 (+) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Isoptericola jiangsuensis strain JSH01     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1131117..1141518
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACI703_RS04990 (ACI703_04990) tsaB 1132747..1133460 (+) 714 WP_406235076.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  ACI703_RS04995 (ACI703_04995) - 1134045..1134929 (-) 885 WP_108769694.1 energy transducer TonB family protein -
  ACI703_RS05000 (ACI703_05000) gshB 1134929..1135876 (-) 948 WP_164075076.1 glutathione synthase -
  ACI703_RS05005 (ACI703_05005) pilG 1136117..1136518 (+) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  ACI703_RS05010 (ACI703_05010) - 1136537..1136899 (+) 363 WP_079222863.1 response regulator -
  ACI703_RS05015 (ACI703_05015) - 1136899..1137429 (+) 531 WP_200753466.1 chemotaxis protein CheW -
  ACI703_RS05020 (ACI703_05020) - 1137471..1139507 (+) 2037 WP_406235081.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=1073979 ACI703_RS05005 WP_005418455.1 1136117..1136518(+) (pilG) [Isoptericola jiangsuensis strain JSH01]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=1073979 ACI703_RS05005 WP_005418455.1 1136117..1136518(+) (pilG) [Isoptericola jiangsuensis strain JSH01]
ATGACTGAAAACACGACTGCGGGCGGGGAGCTCGCAGGACTCCGGGTGATGGTCATCGATGACTCGAAGACCATCCGCCG
GACTGCGGAAACGCTGCTGAAGCGCGAAGGCTGCGAAGTGGTGACCGCGACCGATGGCTTCGAGGCCTTGGCCAAGATCG
CCGACCAGCAGCCACAGATCATCTTCGTGGACATCATGATGCCCCGTCTCGACGGGTATCAGACCTGCGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCAACGCCGGTCATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCCGCGGACGCAT
CGTCGGCTCGGAACAGTACCTGACCAAGCCTTTCACGCGGGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677

Multiple sequence alignment