Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACIY8B_RS25850 Genome accession   NZ_CP173731
Coordinates   5260330..5260926 (-) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain 220-59     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 5255330..5265926
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACIY8B_RS25835 (ACIY8B_25835) helD 5255538..5257592 (-) 2055 WP_004179218.1 DNA helicase IV -
  ACIY8B_RS25840 (ACIY8B_25840) - 5257717..5258163 (+) 447 WP_002898425.1 YccF domain-containing protein -
  ACIY8B_RS25845 (ACIY8B_25845) yccS 5258181..5260316 (+) 2136 WP_023316617.1 YccS family putative transporter -
  ACIY8B_RS25850 (ACIY8B_25850) sxy/tfoX 5260330..5260926 (-) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  ACIY8B_RS25855 (ACIY8B_25855) sulA 5261275..5261784 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  ACIY8B_RS25860 (ACIY8B_25860) ompA 5262137..5263207 (+) 1071 WP_002898408.1 porin OmpA -
  ACIY8B_RS25865 (ACIY8B_25865) matP 5263339..5263791 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  ACIY8B_RS25870 (ACIY8B_25870) - 5263977..5265734 (+) 1758 WP_040150863.1 Lon protease family protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=1073920 ACIY8B_RS25850 WP_004150836.1 5260330..5260926(-) (sxy/tfoX) [Klebsiella pneumoniae strain 220-59]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1073920 ACIY8B_RS25850 WP_004150836.1 5260330..5260926(-) (sxy/tfoX) [Klebsiella pneumoniae strain 220-59]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCTAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGTTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment