Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   AABA74_RS01805 Genome accession   NZ_AP028932
Coordinates   345050..345214 (+) Length   54 a.a.
NCBI ID   WP_269195014.1    Uniprot ID   -
Organism   Bacillus velezensis strain RB.IBE29     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 340050..350214
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AABA74_RS01800 srfAB 341941..345033 (+) 3093 Protein_314 surfactin non-ribosomal peptide synthetase SrfAB -
  AABA74_RS01805 comS 345050..345214 (+) 165 WP_269195014.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6238.22 Da        Isoelectric Point: 11.7559

>NTDB_id=107392 AABA74_RS01805 WP_269195014.1 345050..345214(+) (comS) [Bacillus velezensis strain RB.IBE29]
MRARRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=107392 AABA74_RS01805 WP_269195014.1 345050..345214(+) (comS) [Bacillus velezensis strain RB.IBE29]
ATGAGAGCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5

Multiple sequence alignment