Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACI7YU_RS24775 Genome accession   NZ_CP173722
Coordinates   5563663..5564067 (-) Length   134 a.a.
NCBI ID   WP_016772743.1    Uniprot ID   A0AAU7ESX1
Organism   Pseudomonas siliginis strain P     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5558663..5569067
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACI7YU_RS24760 (ACI7YU_24770) - 5560429..5562477 (-) 2049 WP_041476807.1 methyl-accepting chemotaxis protein -
  ACI7YU_RS24765 (ACI7YU_24775) - 5562687..5563226 (-) 540 WP_406227782.1 chemotaxis protein CheW -
  ACI7YU_RS24770 (ACI7YU_24780) pilH 5563237..5563602 (-) 366 WP_016772744.1 twitching motility response regulator PilH -
  ACI7YU_RS24775 (ACI7YU_24785) pilG 5563663..5564067 (-) 405 WP_016772743.1 twitching motility response regulator PilG Regulator
  ACI7YU_RS24780 (ACI7YU_24790) gshB 5564293..5565264 (+) 972 WP_076564433.1 glutathione synthase -
  ACI7YU_RS24785 (ACI7YU_24795) - 5565393..5566292 (+) 900 WP_406227785.1 energy transducer TonB -
  ACI7YU_RS24790 (ACI7YU_24800) - 5566428..5567000 (+) 573 WP_150636915.1 YqgE/AlgH family protein -
  ACI7YU_RS24795 (ACI7YU_24805) ruvX 5567000..5567437 (+) 438 WP_041476809.1 Holliday junction resolvase RuvX -
  ACI7YU_RS24800 (ACI7YU_24810) pyrR 5567519..5568025 (+) 507 WP_016772737.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ACI7YU_RS24805 (ACI7YU_24815) - 5568053..5569057 (+) 1005 WP_016772736.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14616.03 Da        Isoelectric Point: 7.2443

>NTDB_id=1073844 ACI7YU_RS24775 WP_016772743.1 5563663..5564067(-) (pilG) [Pseudomonas siliginis strain P]
MEQQSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADHHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
ATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=1073844 ACI7YU_RS24775 WP_016772743.1 5563663..5564067(-) (pilG) [Pseudomonas siliginis strain P]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTGATCGACGACTCGAAAACGATTCGCCGCACCGCCGAAACATTGTT
GAAGAATGTCGGTTGCGAAGTGATCACCGCCATCGACGGTTTCGATGCGCTGGCGAAGATTGCCGACCACCATCCCGGGA
TCATCTTTGTCGACATCATGATGCCGCGTCTGGACGGTTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCCTTCAAG
GCGACGCCGGTGATCATGCTGTCGTCCAGGGACGGTCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGCTCTGATCAATT
TCTGACCAAACCGTTCAGCAAAGAAGAACTGCTCAACGCGATCCAGGCCCATGTTCCGGGCTTCGCCGCCGTTTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

93.284

0.701

Multiple sequence alignment