Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ACAM22_RS09920 Genome accession   NZ_AP028929
Coordinates   2110136..2110894 (-) Length   252 a.a.
NCBI ID   WP_369606764.1    Uniprot ID   A0AAT9G3I9
Organism   Streptococcus sp. SN-1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2105136..2115894
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACAM22_RS09895 (MASAN616_18970) pth 2105167..2105736 (-) 570 WP_060806043.1 aminoacyl-tRNA hydrolase -
  ACAM22_RS09900 (MASAN616_18980) ychF 2105808..2106923 (-) 1116 WP_001218707.1 redox-regulated ATPase YchF -
  ACAM22_RS09905 (MASAN616_18990) - 2107008..2107202 (-) 195 WP_265471660.1 DUF951 family protein -
  ACAM22_RS09910 (MASAN616_19000) dnaN 2107267..2108403 (-) 1137 WP_000581174.1 DNA polymerase III subunit beta -
  ACAM22_RS09915 (MASAN616_19010) dnaA 2108562..2109923 (-) 1362 WP_023944973.1 chromosomal replication initiator protein DnaA -
  ACAM22_RS09920 (MASAN616_19020) spo0J 2110136..2110894 (-) 759 WP_369606764.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29040.38 Da        Isoelectric Point: 6.7525

>NTDB_id=107369 ACAM22_RS09920 WP_369606764.1 2110136..2110894(-) (spo0J) [Streptococcus sp. SN-1]
MEKFEMISITDIQKNPYQPRKEFDGEKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVIKK
LSDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKLQKNDHFIQNEEEQLKKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=107369 ACAM22_RS09920 WP_369606764.1 2110136..2110894(-) (spo0J) [Streptococcus sp. SN-1]
ATGGAAAAATTTGAAATGATTTCTATCACGGATATACAAAAAAATCCCTATCAACCTCGAAAAGAATTTGATGGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAAAGACGCTATCGGGCTTCACTTTTAGCTGGTCTAAGGTCTATCCCAGCTGTTATTAAAAAG
CTTTCAGACCAAGAGATGATGGTCCAATCCATTATTGAAAATTTGCAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTTACCCATGCTGAAATTGCAGATAAAATGGGCAAGTCTCGTCCATACATCA
GCAACTCTATTCGCTTGCTGTCCTTGCCAGAACAGATCCTTTCAGAAGTAGAAAATGGCAAACTATCACAAGCTCATGCG
CGTTCTCTAGTTGGGTTGAATAAGGAACAACAAGACTATTTCTTTCAACGAATTATAGAAGAAGACATTTCTGTAAGGAA
GTTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACTGCAAAAAAATGATCATTTCATACAAAATGAAGAAGAACAGT
TAAAAAAACTACTCGGATTAGATGTAGAGATTAAACTGTCTAAAAAAGATAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATACAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.988

100

0.512

Multiple sequence alignment