Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   ACI1MQ_RS05760 Genome accession   NZ_CP173656
Coordinates   1072092..1072697 (+) Length   201 a.a.
NCBI ID   WP_001202375.1    Uniprot ID   A0A5I0N148
Organism   Salmonella enterica subsp. enterica serovar Enteritidis strain S-28554     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 1067092..1077697
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACI1MQ_RS05740 (ACI1MQ_05735) - 1067487..1069247 (-) 1761 WP_000156448.1 Lon protease family protein -
  ACI1MQ_RS05745 (ACI1MQ_05740) matP 1069433..1069885 (+) 453 WP_000877172.1 macrodomain Ter protein MatP -
  ACI1MQ_RS05750 (ACI1MQ_05745) ompA 1069957..1071009 (-) 1053 WP_001674965.1 porin OmpA -
  ACI1MQ_RS05755 (ACI1MQ_05750) sulA 1071366..1071875 (-) 510 WP_000288733.1 SOS-induced cell division inhibitor SulA -
  ACI1MQ_RS05760 (ACI1MQ_05755) sxy/tfoX 1072092..1072697 (+) 606 WP_001202375.1 TfoX/Sxy family DNA transformation protein Regulator
  ACI1MQ_RS05765 (ACI1MQ_05760) yccS 1072684..1074837 (-) 2154 WP_000950876.1 YccS family putative transporter -
  ACI1MQ_RS05770 (ACI1MQ_05765) - 1074856..1075302 (-) 447 WP_001261222.1 YccF domain-containing protein -
  ACI1MQ_RS05775 (ACI1MQ_05770) helD 1075426..1077480 (+) 2055 WP_000420505.1 DNA helicase IV -

Sequence


Protein


Download         Length: 201 a.a.        Molecular weight: 23174.94 Da        Isoelectric Point: 8.7403

>NTDB_id=1073518 ACI1MQ_RS05760 WP_001202375.1 1072092..1072697(+) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Enteritidis strain S-28554]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG

Nucleotide


Download         Length: 606 bp        

>NTDB_id=1073518 ACI1MQ_RS05760 WP_001202375.1 1072092..1072697(+) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Enteritidis strain S-28554]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCCCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTACGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTTCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5I0N148

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

75.879

99.005

0.751


Multiple sequence alignment