Detailed information NTG1073328

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ACI513_RS12685
• Genome accession: NZ_CP173626
• Coordinates: 2746561..2747670 (+)
• Length: 369 a.a.
• NCBI ID: WP_404984421.1
• Uniprot ID: -
• Organism: Chryseobacterium sp. M5
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2741561..2752670

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI513_RS12665 (ACI513_12665)	-	2742425..2743453 (+)	1029	WP_404984418.1	hypothetical protein	-
ACI513_RS12670 (ACI513_12670)	-	2743498..2744421 (-)	924	WP_404984419.1	DUF3078 domain-containing protein	-
ACI513_RS12675 (ACI513_12675)	-	2744626..2745558 (-)	933	WP_074230670.1	DUF3078 domain-containing protein	-
ACI513_RS12680 (ACI513_12680)	-	2745758..2746525 (+)	768	WP_404984420.1	rhomboid family intramembrane serine protease	-
ACI513_RS12685 (ACI513_12685)	dprA	2746561..2747670 (+)	1110	WP_404984421.1	DNA-processing protein DprA	Machinery gene
ACI513_RS12690 (ACI513_12690)	gdhA	2747862..2749220 (+)	1359	WP_074230667.1	NADP-specific glutamate dehydrogenase	-
ACI513_RS12695 (ACI513_12695)	-	2749363..2749725 (+)	363	WP_404984422.1	iron chaperone	-
ACI513_RS12700 (ACI513_12700)	-	2749847..2750335 (-)	489	WP_404984423.1	YkgJ family cysteine cluster protein	-
ACI513_RS12705 (ACI513_12705)	-	2750464..2750844 (+)	381	WP_204531603.1	group III truncated hemoglobin	-
ACI513_RS12710 (ACI513_12710)	-	2750875..2751945 (-)	1071	WP_074230663.1	calcium:proton antiporter	-
ACI513_RS12715 (ACI513_12715)	-	2752287..2752625 (-)	339	WP_404984424.1	DUF6122 family protein	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 41437.21 Da
• Isoelectric Point: 6.9688

>NTDB_id=1073328 ACI513_RS12685 WP_404984421.1 2746561..2747670(+) (dprA) [Chryseobacterium sp. M5]
MYSEEHLYSIALRECNFIGDINFSKLVRHFGTAENVWKTSKKELSKTDGIGTKIISDIGNPEHLKFAEKELSFCEKNSIK
INLRHQNDLPFLLNECDDAPAILYQKGSFETNLKTISLVGTRNITSYGKKFIEDFFEESKSHQFISVSGLALGVDKEVHE
QSLKHQIPTIGVLAHGFHTFYPSKNKKLSEKIIEENGGLLTEFNSSRKPDRENFIQRNRIVAGISPATIVVETAFGGGSV
STATFANTYNRDVFALPGRIGDKYSQGCNHLIFQNKATAISTIKDLLDLLGFNDPKEKIEELFPHSKITIQLSENQELIY
KNISENPHISLDDLAEKISVSSHKLLPVILELELLGKVKSFSGRQFIAM

Nucleotide

• Length: 1110 bp

>NTDB_id=1073328 ACI513_RS12685 WP_404984421.1 2746561..2747670(+) (dprA) [Chryseobacterium sp. M5]
ATGTATTCTGAAGAACATCTTTATTCTATCGCTCTTCGCGAGTGTAATTTTATTGGTGATATTAATTTTTCCAAACTTGT
ACGCCATTTTGGAACAGCAGAAAATGTTTGGAAAACTTCTAAAAAGGAACTCAGCAAAACCGACGGAATCGGTACAAAAA
TTATTTCAGATATTGGAAATCCTGAACATCTTAAATTTGCCGAAAAAGAACTTTCATTTTGCGAAAAAAATTCCATAAAA
ATTAATTTGCGTCATCAAAACGACCTTCCTTTTTTATTGAATGAATGTGATGATGCTCCTGCAATACTTTATCAGAAAGG
AAGCTTTGAAACCAATTTAAAAACTATAAGTTTAGTCGGAACCAGAAATATAACGTCTTACGGGAAAAAATTCATTGAAG
ATTTTTTTGAAGAATCAAAATCCCATCAGTTTATTTCTGTCAGCGGTTTGGCTTTGGGTGTTGACAAAGAAGTTCATGAG
CAATCTTTAAAACATCAGATTCCTACCATCGGAGTTTTAGCGCATGGTTTCCACACCTTCTACCCTTCCAAAAACAAAAA
ACTTTCAGAAAAAATTATTGAAGAAAACGGAGGATTGCTTACCGAATTTAATTCGTCAAGAAAGCCAGATCGTGAAAATT
TCATCCAAAGAAACAGAATTGTTGCCGGAATTTCTCCTGCTACTATTGTTGTAGAAACAGCATTCGGAGGCGGATCTGTC
AGTACAGCGACCTTCGCAAACACTTATAACAGAGATGTTTTTGCTCTTCCCGGAAGAATCGGCGACAAATACAGCCAAGG
ATGCAATCATTTAATTTTTCAGAATAAAGCGACCGCAATTTCCACCATAAAAGACTTACTCGATCTGCTCGGATTTAATG
ATCCTAAAGAAAAAATAGAAGAGCTTTTCCCACACAGCAAAATTACAATTCAATTATCTGAAAATCAAGAATTAATATAT
AAAAACATTTCAGAAAATCCACACATCTCCTTAGACGATTTAGCAGAGAAAATATCGGTGTCTTCGCACAAATTATTGCC
TGTAATTTTAGAATTAGAGCTTTTGGGAAAAGTAAAATCGTTTTCCGGGAGACAATTTATAGCAATGTAA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (310-363)

• DNA recombination-mediator protein A (DNA_processg_A) (74-279)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	55.495	98.645	0.547