Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACI514_RS27430 Genome accession   NZ_CP173611
Coordinates   6162690..6163094 (+) Length   134 a.a.
NCBI ID   WP_007913673.1    Uniprot ID   -
Organism   Pseudomonas sp. M20     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6157690..6168094
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACI514_RS27405 (ACI514_27390) pyrR 6158720..6159226 (-) 507 WP_122842295.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ACI514_RS27410 (ACI514_27395) ruvX 6159306..6159743 (-) 438 WP_007913667.1 Holliday junction resolvase RuvX -
  ACI514_RS27415 (ACI514_27400) - 6159743..6160315 (-) 573 WP_016985971.1 YqgE/AlgH family protein -
  ACI514_RS27420 (ACI514_27405) - 6160487..6161386 (-) 900 WP_141126241.1 energy transducer TonB -
  ACI514_RS27425 (ACI514_27410) gshB 6161493..6162464 (-) 972 WP_160059754.1 glutathione synthase -
  ACI514_RS27430 (ACI514_27415) pilG 6162690..6163094 (+) 405 WP_007913673.1 twitching motility response regulator PilG Regulator
  ACI514_RS27435 (ACI514_27420) pilH 6163155..6163520 (+) 366 WP_095125845.1 twitching motility response regulator PilH -
  ACI514_RS27440 (ACI514_27425) - 6163531..6164070 (+) 540 WP_007913675.1 chemotaxis protein CheW -
  ACI514_RS27445 (ACI514_27430) - 6164215..6166263 (+) 2049 WP_405122719.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14592.99 Da        Isoelectric Point: 7.1346

>NTDB_id=1073166 ACI514_RS27430 WP_007913673.1 6162690..6163094(+) (pilG) [Pseudomonas sp. M20]
MEQQSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
ATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=1073166 ACI514_RS27430 WP_007913673.1 6162690..6163094(+) (pilG) [Pseudomonas sp. M20]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTCATCGACGACTCGAAAACGATTCGTCGCACCGCCGAAACCTTATT
GAAGAATGTCGGCTGCGAAGTGATCACGGCGATCGACGGTTTCGACGCGTTGGCGAAGATCGCCGACAACCATCCCGGGA
TCATTTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCGTTCAAG
GCGACGCCGGTGATCATGCTGTCATCGCGTGACGGGCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGCTCTGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCAACGCGATCCAGGCCCACGTTCCGGGCTTTGCCGCCGTTTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

93.284

0.701

Multiple sequence alignment