Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   AAA995_RS08855 Genome accession   NZ_AP028877
Coordinates   1734733..1735443 (+) Length   236 a.a.
NCBI ID   WP_000760673.1    Uniprot ID   A0A062WVH4
Organism   Streptococcus pneumoniae strain 21P20     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1729733..1740443
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAA995_RS08840 (SP21P20_17590) - 1730388..1730636 (-) 249 WP_255123636.1 YneF family protein -
  AAA995_RS08845 (SP21P20_17600) treC 1730778..1732403 (-) 1626 WP_000171211.1 alpha,alpha-phosphotrehalase -
  AAA995_RS08850 (SP21P20_17610) treP 1732581..1734548 (-) 1968 WP_000514304.1 PTS system trehalose-specific EIIBC component -
  AAA995_RS08855 (SP21P20_17620) treR 1734733..1735443 (+) 711 WP_000760673.1 trehalose operon repressor Regulator
  AAA995_RS08860 (SP21P20_17630) - 1735476..1736279 (-) 804 WP_000157672.1 ATP-binding cassette domain-containing protein -
  AAA995_RS08865 - 1736292..1737169 (-) 878 Protein_1755 ABC transporter permease -
  AAA995_RS08870 - 1737181..1738118 (-) 938 Protein_1756 ABC transporter substrate-binding protein -
  AAA995_RS08875 (SP21P20_17680) amiF 1738609..1739535 (-) 927 WP_001291294.1 ATP-binding cassette domain-containing protein Regulator

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27607.78 Da        Isoelectric Point: 8.9698

>NTDB_id=107206 AAA995_RS08855 WP_000760673.1 1734733..1735443(+) (treR) [Streptococcus pneumoniae strain 21P20]
MKKYQQLFKQIQETIQNETYAVGDFLPSEHDLMEQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLT
SYQELVKELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELIPNLTRQIAEQSIY
SYIENGLKLLIDYAQKEITIDHSSDRDKILMDIGKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFRFVDFAKRKK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=107206 AAA995_RS08855 WP_000760673.1 1734733..1735443(+) (treR) [Streptococcus pneumoniae strain 21P20]
ATGAAGAAATACCAACAATTATTTAAGCAAATCCAAGAAACCATTCAAAACGAGACTTACGCTGTCGGAGATTTCCTTCC
TAGCGAGCACGACCTTATGGAGCAATATCAAGTGAGTCGTGATACCGTCCGAAAGGCCCTGTCTCTCCTCCAAGAGGAAG
GATTGATCAAAAAGATAAGAGGGCAAGGTTCTCAAGTCGTCAAAGAAGAAACCGTCAATTTCCCTGTATCCAACCTAACC
AGCTACCAAGAACTAGTTAAAGAACTTGGACTGCGCTCTAAAACCAACGTGGTCAGTCTGGACAAGATTATTATTGATAA
AAAATCCTCACTGATAACCGGTTTCCCAGAGTTTCGGATGGTTTGGAAGGTGGTCCGCCAGCGTGTGGTGGATGATCTGG
TATCCGTTCTGGATACAGACTATCTGGATATGGAACTCATCCCAAATCTCACTCGCCAAATTGCTGAGCAGTCTATCTAT
TCTTATATAGAAAATGGCCTCAAACTCCTTATTGATTATGCTCAGAAGGAAATCACCATTGACCACTCAAGCGACCGAGA
CAAGATTCTCATGGACATTGGCAAAGACCCTTATGTCGTTTCGATTAAATCAAAAGTCTATCTCCAAGACGGGCGCCAAT
TTCAGTTTACCGAAAGTCGCCATAAGTTAGAAAAATTTAGATTTGTAGATTTTGCAAAACGCAAGAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A062WVH4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

59.322

100

0.593

Multiple sequence alignment