Detailed information NTG1072033

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: ACI3L8_RS10370
• Genome accession: NZ_CP173391
• Coordinates: 2257110..2260496 (-)
• Length: 1128 a.a.
• NCBI ID: WP_050910751.1
• Uniprot ID: -
• Organism: Vibrio campbellii strain LB3
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2252110..2265496

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI3L8_RS10355 (ACI3L8_10355)	-	2252420..2253445 (-)	1026	WP_010649800.1	ABC transporter permease	-
ACI3L8_RS10360 (ACI3L8_10360)	-	2253448..2254434 (-)	987	WP_005425282.1	ABC transporter permease	-
ACI3L8_RS10365 (ACI3L8_10365)	-	2254605..2256287 (-)	1683	WP_005425281.1	ABC transporter substrate-binding protein	-
ACI3L8_RS10370 (ACI3L8_10370)	chiS	2257110..2260496 (-)	3387	WP_050910751.1	response regulator	Regulator
ACI3L8_RS10375 (ACI3L8_10375)	rsmC	2260724..2261749 (-)	1026	WP_404971394.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
ACI3L8_RS10380 (ACI3L8_10380)	-	2261826..2262911 (-)	1086	WP_005425277.1	AI-2E family transporter	-
ACI3L8_RS10385 (ACI3L8_10385)	hemL	2263271..2264566 (-)	1296	WP_005425271.1	glutamate-1-semialdehyde 2,1-aminomutase	-
ACI3L8_RS10390 (ACI3L8_10390)	erpA	2264813..2265154 (+)	342	WP_005425270.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127303.02 Da
• Isoelectric Point: 5.2929

>NTDB_id=1072033 ACI3L8_RS10370 WP_050910751.1 2257110..2260496(-) (chiS) [Vibrio campbellii strain LB3]
MFKFYKKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLEEQSTSHLLSVRDTKQQQIIDYFAAQETEVMGFVRS
ELAYASGGRFYGLVNAFSRLGHDIDEARENAQQRYIKGSGDQIKTSILPESSNYVGSERYRLLHKRYHWAYLELLKRSDF
NDILLVDIDGNVTYSINKDDNFGTNLLSGRYKDTALGKTFKRLSEDVSARRKVNEDYTPVVVSDFDIENGKQVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLIAEINRDSSIDTLLVGSDHKPRTINTKQEDIQNSLEIVDKALAGETEVGTYSNRLGEE
MIAAFAPIETRGLTWALVVQLPEKEAFARVHQLEKLFVIAMLIAIILVVIASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TTFNTERKDEIGRLAISFERMQRSIREKIQTIKQQNEELESNIKLIQKQNEELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLVSGANGAIPASQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVSLASATRLVLELSGHLLGNKTIRI
INQVPADLKAVSADPQRLEQVLYNLIGNAIKYTSEGKIVISATVVDDQVRVQVVDTGQGIPAEHLEHIFEPLIQAGQDAS
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLANEEEIKATESLAARGHFQIPEANFDNNDDLSLPENPD
GPLLYVADDEPVNLRVLESFLRLEGYRVRTISDGPETLALIEQEKPELLLLDIMMPGMSGYQVCSELRETYDHAELPIIM
LTALSQTEDRVRGFEAGANDYLTKPFNKQELAARIQAHLTASQAEMRHIENKLLESELRQRAEVEASLLETQGRLLEQLE
SAPEAIICLREDQRIRFANEAACKLFKRSLEQLKRSSADELIAPKFLTVKQPHYCGKIDIYIEDIRQNIEADILKLPEGS
GLDVMYIFNVGGGANAARIHNLETAVEVLSSYAFDGDKDQLQKLKELGGEFTRLADKALGNKKDKQELMREVLVDTMTHA
LEYWESVTGETKFAFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEFILEHCKEQSPERAYIEAQRD
KMQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=1072033 ACI3L8_RS10370 WP_050910751.1 2257110..2260496(-) (chiS) [Vibrio campbellii strain LB3]
ATGTTTAAATTCTACAAAAAGCAGAAATTTAAGCGCCTGCAAAGCACGCTAATGACCGCGTTTTTGGTTCTTAGTATTAC
ACCACTGACGATCACTGCTATTTTCTTCCTCCAATCCCACAGTAAAGATTTGGAAGAACAGAGCACATCCCATCTGCTCT
CAGTCCGTGATACCAAACAACAACAGATCATCGACTACTTTGCAGCTCAAGAAACCGAAGTTATGGGCTTTGTTCGCTCA
GAATTGGCTTATGCCAGTGGCGGGCGCTTCTACGGTTTGGTCAATGCCTTTAGCCGATTAGGCCACGACATCGATGAAGC
AAGAGAGAATGCACAGCAACGCTATATCAAAGGCAGCGGCGATCAAATCAAAACGTCGATTTTACCGGAATCTTCCAACT
ACGTTGGCAGTGAACGTTATCGTCTTCTGCATAAACGTTATCACTGGGCTTACCTAGAGCTATTAAAGCGCTCTGATTTC
AACGATATTTTATTAGTTGATATCGACGGTAACGTTACTTATTCGATCAATAAAGATGATAACTTCGGCACCAACCTGCT
CAGCGGCCGTTACAAAGACACCGCTTTGGGAAAAACATTTAAACGCCTTTCCGAGGATGTAAGCGCGCGCCGAAAAGTCA
ATGAAGATTACACGCCTGTCGTGGTATCCGACTTTGACATTGAAAACGGTAAGCAAGTCGCTTGGTTAGGTGCGCCTATT
GTTCAGCAAGGCTATCTGCACAGCTATGCAATGTTCCGCCTGCCGAACAATGGCATCACAAAGCTGATTGCGGAAATCAA
TCGTGACTCTTCAATTGATACCTTATTAGTTGGCAGTGACCACAAACCTCGTACCATCAACACCAAGCAAGAAGACATCC
AAAACAGTTTAGAGATCGTCGACAAAGCTTTAGCTGGCGAAACGGAAGTGGGCACTTACAGCAACCGTTTAGGCGAAGAG
ATGATTGCGGCATTTGCACCTATTGAGACTCGCGGTCTCACTTGGGCTCTCGTTGTACAGCTTCCTGAGAAAGAGGCCTT
TGCACGTGTCCATCAGCTCGAGAAACTGTTTGTCATTGCGATGCTAATAGCGATCATCTTGGTTGTGATTGCTTCACACT
ACTTATCTAATTTCATCACCTCTCCGCTGCTTAAGCTGACTTGGGCAGCAGAGAAAGTATCTGCCGGCGATCTAGACGAA
ACCACCTTTAATACCGAGCGTAAAGATGAAATCGGTCGACTCGCAATCAGCTTTGAGCGTATGCAGCGTTCAATTCGTGA
AAAGATCCAAACCATCAAGCAACAAAACGAAGAGCTAGAGAGCAACATCAAACTGATCCAAAAGCAAAACGAAGAATTGC
AGTTGGCAGATAAGCTGAAAGATGAATTCCTAGCAACGACGTCTCACGAGTTACGCACACCATTGCACGGTATGGTTGGC
ATTGCAGAGACACTGGTGTCTGGTGCAAATGGCGCGATACCAGCAAGCCAGAAGTACCAATTGGACATCATCATCAAGAG
TGGTCAGCGCCTAGCAAACCTTGTTGATGATCTATTGGATTACCACAAGATGCGCTACGGCAGCATGGATATCCAAAAGT
CTGCAGTGAGTTTAGCCAGTGCAACACGCTTGGTGCTGGAGCTTTCTGGTCACCTATTGGGTAACAAAACCATCCGCATC
ATTAACCAAGTGCCAGCGGATCTGAAAGCAGTCTCAGCAGATCCTCAGCGTTTGGAACAAGTGCTGTATAACTTGATTGG
CAACGCTATTAAGTACACTTCAGAAGGCAAGATCGTCATCTCAGCGACCGTTGTAGATGATCAAGTCCGAGTACAAGTGG
TCGACACTGGTCAGGGTATTCCTGCTGAGCACTTAGAGCACATCTTTGAACCTCTCATCCAAGCAGGTCAAGATGCTAGT
CGTTACCGTCAAGGTGCAGGACTAGGTCTATCTATCAGCCGTCAACTTATCGAGTTGATGGGCGGTTCATTGTATGTCAG
CAGCCAACCTATGGTCGGAACGACATTCAGCTTCACCTTGCCACTCGCTAATGAAGAAGAAATCAAAGCGACGGAAAGCC
TTGCCGCTCGCGGGCATTTCCAAATTCCAGAAGCGAACTTTGACAACAATGACGACTTATCTCTACCTGAAAACCCAGAT
GGTCCATTGCTGTACGTTGCTGATGATGAGCCCGTCAACCTGCGCGTTCTTGAAAGCTTCTTAAGACTTGAAGGCTACCG
AGTTCGTACCATTTCAGACGGCCCTGAGACACTCGCTTTAATTGAACAAGAGAAGCCTGAGTTGCTGCTACTGGATATTA
TGATGCCAGGCATGAGTGGCTATCAGGTTTGTAGTGAACTACGTGAAACTTACGATCATGCAGAGCTGCCAATCATTATG
CTCACAGCGCTAAGCCAAACCGAAGACCGAGTTAGGGGCTTTGAAGCGGGAGCGAACGATTACCTAACCAAACCATTTAA
TAAGCAAGAGCTCGCGGCACGTATTCAGGCCCACTTGACGGCAAGTCAGGCTGAAATGCGCCACATCGAGAACAAGTTAC
TGGAATCGGAGCTACGTCAGCGTGCTGAAGTCGAAGCCAGCCTGCTCGAGACACAAGGTAGACTGCTAGAACAGCTAGAA
TCGGCACCTGAGGCGATTATTTGCCTTCGTGAAGATCAACGTATTCGCTTTGCTAACGAAGCAGCATGTAAGCTATTTAA
ACGTAGCCTAGAACAGCTAAAACGTTCTTCCGCTGATGAGCTAATTGCACCTAAGTTCCTTACGGTTAAGCAGCCGCACT
ACTGTGGCAAGATTGATATCTACATCGAAGATATTCGTCAAAACATTGAAGCAGACATCCTCAAGTTGCCTGAAGGCTCT
GGTTTAGATGTCATGTATATCTTCAATGTAGGAGGCGGCGCGAATGCAGCTCGTATCCATAACCTAGAAACGGCCGTTGA
AGTACTTTCAAGTTACGCATTTGATGGTGATAAAGACCAGCTGCAGAAGCTGAAAGAACTTGGCGGTGAGTTTACTCGCC
TTGCTGATAAAGCATTGGGTAACAAGAAGGACAAACAAGAGCTGATGCGCGAAGTATTAGTCGATACGATGACTCATGCA
TTGGAATATTGGGAATCGGTGACTGGAGAAACCAAGTTTGCCTTTGCTGAACAAAGTGGTTTATGGCGCGTCTACCTCGA
CCGCAGTACATTGCAAACACGTACGCTCGATAAATACATGCGTATTGAGACTTTGCCTAAGACACCGCGCTGGAGGACAG
TACTAAGCTCAATTGAGTTCATTCTGGAGCACTGTAAAGAACAAAGCCCAGAACGCGCTTACATAGAGGCACAGCGCGAT
AAGATGCAAAGACTCCTTACGAGCTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (726-836)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.705	100	0.768