Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxO   Type   Regulator
Locus tag   ACI3L7_RS14910 Genome accession   NZ_CP173387
Coordinates   3285217..3286620 (-) Length   467 a.a.
NCBI ID   WP_038889850.1    Uniprot ID   -
Organism   Vibrio campbellii strain LB135     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context

Location: 3280217..3291620
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACI3L7_RS14875 (ACI3L7_14875) moaE 3280748..3281203 (-) 456 WP_005433207.1 molybdopterin synthase catalytic subunit MoaE -
  ACI3L7_RS14880 (ACI3L7_14880) moaD 3281205..3281462 (-) 258 WP_005433220.1 molybdopterin synthase sulfur carrier subunit -
  ACI3L7_RS14885 (ACI3L7_14885) moaC 3281462..3281938 (-) 477 WP_005433216.1 cyclic pyranopterin monophosphate synthase MoaC -
  ACI3L7_RS14890 (ACI3L7_14890) moaB 3281965..3282477 (-) 513 WP_005433210.1 molybdenum cofactor biosynthesis protein B -
  ACI3L7_RS14895 (ACI3L7_14895) moaA 3282578..3283567 (-) 990 WP_005531402.1 GTP 3',8-cyclase MoaA -
  ACI3L7_RS14900 (ACI3L7_14900) - 3283865..3284758 (+) 894 WP_045372847.1 YvcK family protein -
  ACI3L7_RS14905 (ACI3L7_14905) luxU 3284876..3285220 (-) 345 WP_404970027.1 quorum-sensing phosphorelay protein LuxU -
  ACI3L7_RS14910 (ACI3L7_14910) luxO 3285217..3286620 (-) 1404 WP_038889850.1 quorum-sensing sigma-54 dependent transcriptional regulator LuxO Regulator
  ACI3L7_RS14915 (ACI3L7_14915) uvrB 3286963..3288993 (-) 2031 WP_038889849.1 excinuclease ABC subunit UvrB -
  ACI3L7_RS14925 (ACI3L7_14925) - 3289805..3290245 (-) 441 WP_038889848.1 hypothetical protein -
  ACI3L7_RS14930 (ACI3L7_14930) - 3290265..3291596 (-) 1332 WP_045457981.1 hypothetical protein -

Sequence

Protein


Download         Length: 467 a.a.        Molecular weight: 52154.68 Da        Isoelectric Point: 5.8849

>NTDB_id=1071939 ACI3L7_RS14910 WP_038889850.1 3285217..3286620(-) (luxO) [Vibrio campbellii strain LB135]
MQQMTEGQKSRYLLMVEDTASVAALYRSYLTPLGIDINIVGTGRDAIESLNHRIPDLILLDLRLPDMTGMDVLHAVKKSH
PDVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRVTVNNAIRKATKLKNEADNPGNQNYQGFIGSSQTMQQVYRT
IDSAASSKASIFITGESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAANDRQGAAELADG
GTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRE
RGEDVIEIAYSLLGYMSHEEGKSFVRFAQDVIERFNSYEWPGNVRQLQNVLRNIVVLNNGKEITLDMLPPPLNQPVVRQS
VAKFIEPDIMTVSDIMPLWMTEKMAIEQAIQACEGNIPRAAGYLDVSPSTIYRKLQAWNSKDEKQNV

Nucleotide


Download         Length: 1404 bp        

>NTDB_id=1071939 ACI3L7_RS14910 WP_038889850.1 3285217..3286620(-) (luxO) [Vibrio campbellii strain LB135]
ATGCAACAAATGACAGAAGGTCAAAAGTCTCGTTATCTACTTATGGTAGAAGACACCGCATCCGTTGCGGCACTTTACCG
TTCTTACCTCACGCCACTTGGCATCGATATCAATATTGTTGGAACAGGCAGAGACGCCATTGAAAGCCTGAACCATCGCA
TTCCTGATCTTATTCTGCTCGATCTTCGTCTACCTGATATGACGGGGATGGACGTATTGCACGCGGTGAAGAAAAGCCAT
CCAGACGTGCCAATCATCTTCATGACTGCCCATGGCTCTATCGATACTGCGGTAGAGGCGATGCGCCACGGTTCTCAAGA
CTTCCTAATCAAACCATGTGAAGCAGACCGTTTACGTGTCACGGTGAATAATGCGATCCGCAAAGCAACCAAATTAAAGA
ATGAAGCTGACAACCCTGGTAACCAAAATTACCAAGGCTTCATCGGCAGTAGCCAAACGATGCAGCAGGTTTACCGTACC
ATTGACTCGGCAGCGAGCAGTAAAGCGAGTATTTTCATCACGGGTGAAAGTGGTACGGGTAAAGAAGTGTGTGCCGAAGC
GATTCACGCAGCAAGCAAACGTGGTGATAAGCCGTTTATCGCCATCAACTGTGCGGCAATCCCGAAAGACCTTATTGAAA
GTGAGCTATTTGGTCACGTAAAAGGTGCGTTTACTGGTGCTGCGAATGACCGACAAGGTGCGGCAGAGCTTGCTGATGGC
GGCACGTTGTTCCTTGATGAACTCTGTGAAATGGACTTGGATCTTCAAACTAAGCTATTGCGCTTTATCCAAACGGGTAC
ATTCCAAAAAGTCGGTTCTTCTAAAATGAAGAGCGTGGATGTACGCTTTGTGTGTGCAACTAACCGAGACCCTTGGAAAG
AAGTGCAAGAAGGCCGCTTCCGTGAAGACTTGTATTACCGCTTGTACGTGATTCCTTTGCACCTTCCGCCGCTGCGTGAG
CGTGGTGAAGACGTTATTGAAATTGCATACTCGTTGCTTGGTTATATGTCTCATGAGGAAGGCAAGAGTTTCGTCCGTTT
CGCACAAGACGTGATTGAAAGATTCAACAGCTACGAATGGCCGGGTAACGTTCGCCAGTTGCAAAACGTATTGCGTAATA
TCGTGGTACTGAACAATGGCAAAGAGATCACGCTGGATATGTTACCGCCACCACTGAATCAGCCTGTTGTGCGCCAATCG
GTAGCAAAATTTATTGAACCTGACATTATGACGGTGTCAGATATTATGCCGCTTTGGATGACAGAGAAAATGGCCATCGA
GCAGGCAATTCAAGCGTGTGAAGGCAACATTCCACGCGCTGCTGGCTATTTGGATGTTAGCCCATCAACGATTTATCGCA
AGTTGCAAGCTTGGAATAGCAAGGACGAAAAACAAAACGTATGA

Domains

Predicted by InterproScan.

Bacterial regulatory protein, Fis family (HTH_8)

(418-458)

Response regulator receiver domain (Response_reg)

(14-122)

Sigma-54 interaction domain (Sigma54_activat)

(148-313)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

86.384

95.931

0.829

Multiple sequence alignment