Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxO   Type   Regulator
Locus tag   ACI3L7_RS11510 Genome accession   NZ_CP173387
Coordinates   2536770..2538311 (-) Length   513 a.a.
NCBI ID   WP_045380384.1    Uniprot ID   -
Organism   Vibrio campbellii strain LB135     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context

Location: 2531770..2543311
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACI3L7_RS11490 (ACI3L7_11490) - 2531785..2533206 (-) 1422 WP_404970495.1 lipopolysaccharide biosynthesis protein -
  ACI3L7_RS11495 (ACI3L7_11495) - 2533199..2534371 (-) 1173 WP_404969743.1 glycosyltransferase family 4 protein -
  ACI3L7_RS11500 (ACI3L7_11500) - 2534382..2535566 (-) 1185 WP_404969744.1 glycosyltransferase -
  ACI3L7_RS11505 (ACI3L7_11505) - 2535719..2536795 (-) 1077 WP_394156097.1 glycosyltransferase -
  ACI3L7_RS11510 (ACI3L7_11510) luxO 2536770..2538311 (-) 1542 WP_045380384.1 sigma-54 dependent transcriptional regulator Regulator
  ACI3L7_RS11515 (ACI3L7_11515) - 2538522..2538905 (-) 384 WP_047479344.1 Hpt domain-containing protein -
  ACI3L7_RS11520 (ACI3L7_11520) - 2538918..2539607 (-) 690 WP_005427760.1 AAA family ATPase -
  ACI3L7_RS11525 (ACI3L7_11525) - 2539607..2541709 (-) 2103 WP_404969745.1 SLBB domain-containing protein -
  ACI3L7_RS11530 (ACI3L7_11530) - 2541706..2542560 (-) 855 WP_404969746.1 OmpA family protein -
  ACI3L7_RS11535 (ACI3L7_11535) - 2542586..2542906 (-) 321 WP_005427675.1 STAS domain-containing protein -

Sequence

Protein


Download         Length: 513 a.a.        Molecular weight: 57563.53 Da        Isoelectric Point: 6.2072

>NTDB_id=1071937 ACI3L7_RS11510 WP_045380384.1 2536770..2538311(-) (luxO) [Vibrio campbellii strain LB135]
MRPRVLLVEDSTSLAILYKQYVKDEPYDIFHVETGREAIQFIERNKPQLIILDLKLPDMSGEDVLDWINENEVPTSVIIA
TAHGSVDLAVNLIQKGAEDFLEKPINADRLKTSVALHLKRAKLENLVENIQSTFDRHNYHGFIGSSLPMQAVYKTIDAVA
PTSASVFIVGESGTGKEVCAEAVHRQSDRRDKPFIAINCGAIPRDLMESEIFGHVKGAFTGATTDRKGAATLAHGGTLFL
DELCEMELEMQKKLLRFLQTGTYTPLGGTKEMKVDVRIICATNRDPLKEVEEGRFREDLYYRVHVVPIDMPPLRERGGDI
VTLAKHFLLTYAKQDKKKFKHIGNDVQHVIKNYDWPGNVRQLQNIIRNIVVLNDEDKVTLPHLPVQLTRKPKKTPSVSPA
NTESVKETSFITEQTDSVQNEAFPTSEPTSATYSFSEPENQPTISGAQRASVYFNSDGTIRPMWKVEREAIQNAIAYCDG
NVLNAAVMLELSPSTVYRKKQAWEADEANLKQS

Nucleotide


Download         Length: 1542 bp        

>NTDB_id=1071937 ACI3L7_RS11510 WP_045380384.1 2536770..2538311(-) (luxO) [Vibrio campbellii strain LB135]
ATGAGACCAAGGGTGTTACTGGTAGAGGACTCTACTTCACTAGCCATACTTTATAAGCAGTACGTCAAGGATGAACCTTA
CGACATCTTCCACGTTGAAACTGGACGTGAGGCGATTCAATTCATTGAGCGCAACAAACCACAACTTATTATTCTCGACC
TAAAACTTCCAGACATGTCCGGTGAAGACGTTCTTGATTGGATTAATGAGAATGAGGTTCCAACCTCTGTCATTATAGCA
ACGGCGCATGGAAGCGTTGATCTAGCCGTCAACCTGATCCAGAAAGGCGCAGAAGATTTCCTAGAAAAGCCCATCAATGC
CGATCGTTTGAAAACCTCCGTTGCCTTGCATTTAAAACGTGCCAAACTAGAAAATCTCGTCGAGAACATTCAATCGACTT
TCGATCGTCACAACTATCACGGATTTATTGGCTCTAGTCTTCCAATGCAGGCGGTTTACAAAACCATTGATGCAGTTGCC
CCGACCTCAGCTAGCGTGTTTATCGTTGGTGAAAGTGGAACGGGTAAAGAAGTGTGTGCCGAAGCGGTTCACCGACAAAG
TGATCGCAGAGACAAGCCATTCATTGCAATTAACTGCGGCGCTATCCCTCGTGATTTAATGGAAAGCGAAATATTTGGCC
ATGTAAAGGGGGCTTTTACTGGCGCGACCACCGATCGTAAAGGTGCAGCGACCCTTGCCCATGGCGGCACACTATTCTTG
GACGAACTGTGTGAAATGGAGCTAGAGATGCAGAAAAAGTTATTACGCTTTCTGCAAACGGGAACCTACACGCCTCTCGG
GGGCACCAAAGAGATGAAGGTCGATGTTCGTATTATCTGTGCAACCAACCGAGACCCTCTGAAAGAGGTAGAAGAAGGTC
GTTTTCGTGAAGACTTGTATTATCGCGTTCATGTCGTTCCCATCGACATGCCGCCGCTAAGAGAAAGAGGTGGTGACATT
GTCACGCTAGCTAAGCACTTTTTGCTCACTTATGCCAAACAAGATAAGAAGAAGTTCAAACACATCGGTAACGACGTTCA
GCATGTCATTAAAAACTACGACTGGCCAGGGAATGTTCGCCAGCTACAAAACATCATTCGTAACATTGTTGTATTAAATG
ATGAAGATAAGGTCACGTTACCGCACTTGCCTGTTCAACTGACTCGTAAGCCGAAAAAGACGCCTTCTGTATCGCCTGCG
AATACTGAGAGCGTAAAAGAAACGAGCTTCATTACCGAGCAAACCGACTCCGTGCAGAATGAAGCCTTCCCAACCTCGGA
GCCAACAAGCGCCACCTATTCTTTCTCTGAGCCTGAAAACCAACCAACTATCTCTGGAGCACAAAGAGCTTCAGTCTATT
TTAATTCAGACGGCACCATTCGTCCGATGTGGAAAGTCGAACGAGAGGCGATTCAAAACGCAATTGCTTACTGTGATGGT
AACGTACTTAACGCTGCGGTGATGTTGGAACTCAGCCCTTCAACGGTCTACCGCAAAAAACAAGCGTGGGAAGCAGATGA
AGCTAATCTCAAACAATCTTGA

Domains

Predicted by InterproScan.

Bacterial regulatory protein, Fis family (HTH_8)

(463-499)

Response regulator receiver domain (Response_reg)

(5-114)

Sigma-54 interaction domain (Sigma54_activat)

(143-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

49.799

97.076

0.483

Multiple sequence alignment