Detailed information NTG1071926

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACI3L7_RS05215
• Genome accession: NZ_CP173387
• Coordinates: 1104184..1105191 (-)
• Length: 335 a.a.
• NCBI ID: WP_005429951.1
• Uniprot ID: A0A0A3FEU3
• Organism: Vibrio campbellii strain LB135
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1099184..1110191

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI3L7_RS05195 (ACI3L7_05195)	-	1099709..1100626 (-)	918	WP_047480383.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACI3L7_RS05200 (ACI3L7_05200)	hslU	1101436..1102767 (-)	1332	WP_079402061.1	HslU--HslV peptidase ATPase subunit	-
ACI3L7_RS05205 (ACI3L7_05205)	hslV	1102797..1103348 (-)	552	WP_005435051.1	ATP-dependent protease subunit HslV	-
ACI3L7_RS05210 (ACI3L7_05210)	-	1103464..1104015 (-)	552	WP_005429952.1	SPOR domain-containing protein	-
ACI3L7_RS05215 (ACI3L7_05215)	cytR	1104184..1105191 (-)	1008	WP_005429951.1	DNA-binding transcriptional regulator CytR	Regulator
ACI3L7_RS05220 (ACI3L7_05220)	priA	1105398..1107599 (-)	2202	WP_404970348.1	primosomal protein N'	-
ACI3L7_RS05225 (ACI3L7_05225)	rpmE	1107895..1108113 (+)	219	WP_005429947.1	50S ribosomal protein L31	-
ACI3L7_RS05230 (ACI3L7_05230)	rpsJ	1108587..1108898 (+)	312	WP_004410492.1	30S ribosomal protein S10	-
ACI3L7_RS05235 (ACI3L7_05235)	rplC	1108913..1109542 (+)	630	WP_005435072.1	50S ribosomal protein L3	-
ACI3L7_RS05240 (ACI3L7_05240)	rplD	1109560..1110162 (+)	603	WP_005435074.1	50S ribosomal protein L4	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36912.44 Da
• Isoelectric Point: 6.1645

>NTDB_id=1071926 ACI3L7_RS05215 WP_005429951.1 1104184..1105191(-) (cytR) [Vibrio campbellii strain LB135]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDSAALCQFRHQGYQQALRRAGINKEEQYTVIADFSFDGGVQAVRKLLELPEPPTA
LFCHCDTMAIGAIQEAKRLGLRIPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPPLR

Nucleotide

• Length: 1008 bp

>NTDB_id=1071926 ACI3L7_RS05215 WP_005429951.1 1104184..1105191(-) (cytR) [Vibrio campbellii strain LB135]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGGGTATCTACTGCGACGGTATCAAGAGCATTAATGAATCCAGAAAA
AGTCTCTTCTTCAACAAGAAAGAGAGTGGAAGATGCCGTACTAGAAGCTGGTTATTCACCAAATTCATTAGCTCGTAACT
TACGCAGAAATGAATCAAAAACCATTGTCACCATCGTACCGGACATTTGCGACCCGTACTTCTCAGAGATCATTCGTGGT
ATTGAAGATGCAGCAATGGAACACGGCTATCTTGTTCTATTAGGCGACAGTGGTCAGCAGAAAAAGCGTGAAAGCTCGTT
TGTTAACTTAGTCTTTACTAAACAAGCAGATGGTATGCTTTTGCTTGGTACTGATCTGCCGTTTGATGTCAGCAAGCCTG
AGCAGAAAAATCTGCCACCTATGGTGATGGCGTGTGAATTTGCTCCAGAGTTAGAACTGCCAACCGTTCATATCGATAAC
CTAACCTCAGCATTCGAAGCCGTGAACTACCTTACTCAGTTAGGTCATAAGCGTATTGCTCAGATCTCTGGCCCAGACTC
TGCTGCTCTGTGTCAGTTCCGCCACCAAGGTTACCAACAAGCACTGCGTCGAGCGGGTATTAATAAAGAGGAGCAATACA
CTGTTATTGCCGACTTCTCTTTTGACGGCGGAGTACAAGCCGTGCGTAAACTGCTTGAGCTTCCAGAGCCACCGACCGCT
CTATTCTGTCACTGTGACACCATGGCAATTGGTGCTATTCAAGAAGCGAAGCGCCTAGGTCTGCGTATTCCTCAAGACCT
GTCCGTAGTCGGCTTTGATGACATTCAGTTCGCTCAATATTGCGATCCACCGCTAACCACCATCTCTCAACCTCGTTATG
AGATCGGTCGCCAAGCGATGTTGATGATGCTTGAGTTGCTTAAAGGTCACGACGTGCATTCTGGTTCTCGCCTACTCGAG
ACCAAACTTGTTGTGCGTGGCAGTGCAGCGCCACCGCCACTTCGATAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A0A3FEU3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	95.783	99.104	0.949
cytR	Vibrio cholerae C6706	90.964	99.104	0.901