Detailed information NTG1071879

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACI3L9_RS09885
• Genome accession: NZ_CP173385
• Coordinates: 2160053..2161060 (-)
• Length: 335 a.a.
• NCBI ID: WP_005429951.1
• Uniprot ID: A0A0A3FEU3
• Organism: Vibrio campbellii strain LB198
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2155053..2166060

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI3L9_RS09865 (ACI3L9_09865)	-	2155579..2156496 (-)	918	WP_079402059.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACI3L9_RS09870 (ACI3L9_09870)	hslU	2157305..2158636 (-)	1332	WP_079402061.1	HslU--HslV peptidase ATPase subunit	-
ACI3L9_RS09875 (ACI3L9_09875)	hslV	2158666..2159217 (-)	552	WP_005435051.1	ATP-dependent protease subunit HslV	-
ACI3L9_RS09880 (ACI3L9_09880)	-	2159333..2159884 (-)	552	WP_047480389.1	SPOR domain-containing protein	-
ACI3L9_RS09885 (ACI3L9_09885)	cytR	2160053..2161060 (-)	1008	WP_005429951.1	DNA-binding transcriptional regulator CytR	Regulator
ACI3L9_RS09890 (ACI3L9_09890)	priA	2161267..2163468 (-)	2202	WP_079402062.1	primosomal protein N'	-
ACI3L9_RS09895 (ACI3L9_09895)	rpmE	2163764..2163982 (+)	219	WP_005429947.1	50S ribosomal protein L31	-
ACI3L9_RS09900 (ACI3L9_09900)	rpsJ	2164456..2164767 (+)	312	WP_004410492.1	30S ribosomal protein S10	-
ACI3L9_RS09905 (ACI3L9_09905)	rplC	2164782..2165411 (+)	630	WP_005435072.1	50S ribosomal protein L3	-
ACI3L9_RS09910 (ACI3L9_09910)	rplD	2165429..2166031 (+)	603	WP_005435074.1	50S ribosomal protein L4	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36912.44 Da
• Isoelectric Point: 6.1645

>NTDB_id=1071879 ACI3L9_RS09885 WP_005429951.1 2160053..2161060(-) (cytR) [Vibrio campbellii strain LB198]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDSAALCQFRHQGYQQALRRAGINKEEQYTVIADFSFDGGVQAVRKLLELPEPPTA
LFCHCDTMAIGAIQEAKRLGLRIPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPPLR

Nucleotide

• Length: 1008 bp

>NTDB_id=1071879 ACI3L9_RS09885 WP_005429951.1 2160053..2161060(-) (cytR) [Vibrio campbellii strain LB198]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGGGTATCTACTGCGACGGTATCAAGAGCATTAATGAATCCAGAAAA
AGTCTCTTCTTCAACAAGAAAGAGAGTGGAAGATGCCGTACTAGAAGCTGGTTATTCACCAAATTCATTAGCTCGTAACT
TACGCAGAAATGAATCAAAAACCATTGTCACCATCGTACCGGACATTTGTGACCCGTACTTCTCAGAGATCATTCGTGGT
ATTGAAGATGCAGCAATGGAACACGGCTATCTTGTTCTATTGGGCGACAGTGGTCAGCAGAAAAAGCGTGAAAGCTCGTT
TGTTAACTTAGTCTTTACTAAACAAGCAGATGGTATGCTTTTGCTTGGTACTGATCTGCCGTTTGATGTCAGCAAGCCTG
AACAGAAAAACCTGCCACCTATGGTGATGGCGTGTGAATTTGCTCCAGAGTTGGAGCTGCCAACCGTTCATATCGATAAC
CTAACCTCAGCCTTTGAAGCCGTGAACTACCTTACTCAGTTAGGTCACAAGCGTATTGCTCAGATCTCTGGCCCAGACTC
TGCTGCTCTGTGTCAGTTCCGCCACCAAGGTTACCAACAAGCTCTACGTCGTGCGGGTATTAATAAAGAGGAGCAATACA
CCGTTATTGCCGACTTCTCTTTTGACGGCGGAGTACAAGCCGTGCGTAAACTGCTTGAGCTTCCAGAGCCACCGACCGCT
CTATTCTGTCACTGTGACACCATGGCAATTGGTGCTATTCAAGAAGCGAAGCGCCTAGGTCTGCGTATTCCTCAAGACCT
GTCCGTAGTCGGCTTTGATGACATTCAGTTCGCTCAATATTGCGATCCACCGCTAACCACCATCTCTCAACCTCGTTATG
AGATCGGTCGCCAAGCGATGTTGATGATGCTTGAGTTGCTTAAAGGTCACGACGTGCATTCTGGTTCTCGCCTACTCGAG
ACCAAACTTGTTGTGCGTGGCAGTGCAGCGCCACCGCCACTTCGATAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A0A3FEU3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	95.783	99.104	0.949
cytR	Vibrio cholerae C6706	90.964	99.104	0.901