Detailed information NTG1071840

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACI3L6_RS15325
• Genome accession: NZ_CP173383
• Coordinates: 3403608..3404615 (-)
• Length: 335 a.a.
• NCBI ID: WP_005429951.1
• Uniprot ID: A0A0A3FEU3
• Organism: Vibrio campbellii strain LB314
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3398608..3409615

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI3L6_RS15305 (ACI3L6_15305)	-	3399134..3400051 (-)	918	WP_079402059.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACI3L6_RS15310 (ACI3L6_15310)	hslU	3400860..3402191 (-)	1332	WP_079402061.1	HslU--HslV peptidase ATPase subunit	-
ACI3L6_RS15315 (ACI3L6_15315)	hslV	3402221..3402772 (-)	552	WP_005435051.1	ATP-dependent protease subunit HslV	-
ACI3L6_RS15320 (ACI3L6_15320)	-	3402888..3403439 (-)	552	WP_047480389.1	SPOR domain-containing protein	-
ACI3L6_RS15325 (ACI3L6_15325)	cytR	3403608..3404615 (-)	1008	WP_005429951.1	DNA-binding transcriptional regulator CytR	Regulator
ACI3L6_RS15330 (ACI3L6_15330)	priA	3404822..3407023 (-)	2202	WP_079402062.1	primosomal protein N'	-
ACI3L6_RS15335 (ACI3L6_15335)	rpmE	3407319..3407537 (+)	219	WP_005429947.1	50S ribosomal protein L31	-
ACI3L6_RS15340 (ACI3L6_15340)	rpsJ	3408011..3408322 (+)	312	WP_004410492.1	30S ribosomal protein S10	-
ACI3L6_RS15345 (ACI3L6_15345)	rplC	3408337..3408966 (+)	630	WP_005435072.1	50S ribosomal protein L3	-
ACI3L6_RS15350 (ACI3L6_15350)	rplD	3408984..3409586 (+)	603	WP_005435074.1	50S ribosomal protein L4	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36912.44 Da
• Isoelectric Point: 6.1645

>NTDB_id=1071840 ACI3L6_RS15325 WP_005429951.1 3403608..3404615(-) (cytR) [Vibrio campbellii strain LB314]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDSAALCQFRHQGYQQALRRAGINKEEQYTVIADFSFDGGVQAVRKLLELPEPPTA
LFCHCDTMAIGAIQEAKRLGLRIPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPPLR

Nucleotide

• Length: 1008 bp

>NTDB_id=1071840 ACI3L6_RS15325 WP_005429951.1 3403608..3404615(-) (cytR) [Vibrio campbellii strain LB314]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGGGTATCTACTGCGACGGTATCAAGAGCATTAATGAATCCAGAAAA
AGTCTCTTCTTCAACAAGAAAGAGAGTGGAAGATGCCGTACTAGAAGCTGGTTATTCACCAAATTCATTAGCTCGTAACT
TACGCAGAAATGAATCAAAAACCATTGTCACCATCGTACCGGACATTTGTGACCCGTACTTCTCAGAGATCATTCGTGGT
ATTGAAGATGCAGCAATGGAACACGGCTATCTTGTTCTATTGGGCGACAGTGGTCAGCAGAAAAAGCGTGAAAGCTCGTT
TGTTAACTTAGTCTTTACTAAACAAGCAGATGGTATGCTTTTGCTTGGTACTGATCTGCCGTTTGATGTCAGCAAGCCTG
AACAGAAAAACCTGCCACCTATGGTGATGGCGTGTGAATTTGCTCCAGAGTTGGAGCTGCCAACCGTTCATATCGATAAC
CTAACCTCAGCCTTTGAAGCCGTGAACTACCTTACTCAGTTAGGTCACAAGCGTATTGCTCAGATCTCTGGCCCAGACTC
TGCTGCTCTGTGTCAGTTCCGCCACCAAGGTTACCAACAAGCTCTACGTCGTGCGGGTATTAATAAAGAGGAGCAATACA
CCGTTATTGCCGACTTCTCTTTTGACGGCGGAGTACAAGCCGTGCGTAAACTGCTTGAGCTTCCAGAGCCACCGACCGCT
CTATTCTGTCACTGTGACACCATGGCAATTGGTGCTATTCAAGAAGCGAAGCGCCTAGGTCTGCGTATTCCTCAAGACCT
GTCCGTAGTCGGCTTTGATGACATTCAGTTCGCTCAATATTGCGATCCACCGCTAACCACCATCTCTCAACCTCGTTATG
AGATCGGTCGCCAAGCGATGTTGATGATGCTTGAGTTGCTTAAAGGTCACGACGTGCATTCTGGTTCTCGCCTACTCGAG
ACCAAACTTGTTGTGCGTGGCAGTGCAGCGCCACCGCCACTTCGATAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A0A3FEU3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	95.783	99.104	0.949
cytR	Vibrio cholerae C6706	90.964	99.104	0.901