Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   ACI1MU_RS05775 Genome accession   NZ_CP173378
Coordinates   1072138..1072743 (+) Length   201 a.a.
NCBI ID   WP_001202375.1    Uniprot ID   A0A5I0N148
Organism   Salmonella enterica subsp. enterica serovar Enteritidis strain S-28456     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 1067138..1077743
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACI1MU_RS05755 (ACI1MU_05755) - 1067532..1069292 (-) 1761 WP_017465791.1 Lon protease family protein -
  ACI1MU_RS05760 (ACI1MU_05760) matP 1069478..1069930 (+) 453 WP_017465792.1 macrodomain Ter protein MatP -
  ACI1MU_RS05765 (ACI1MU_05765) ompA 1070002..1071054 (-) 1053 WP_001674965.1 porin OmpA -
  ACI1MU_RS05770 (ACI1MU_05770) sulA 1071412..1071921 (-) 510 WP_017465793.1 SOS-induced cell division inhibitor SulA -
  ACI1MU_RS05775 (ACI1MU_05775) sxy/tfoX 1072138..1072743 (+) 606 WP_001202375.1 TfoX/Sxy family DNA transformation protein Regulator
  ACI1MU_RS05780 (ACI1MU_05780) yccS 1072730..1074883 (-) 2154 WP_000950861.1 YccS family putative transporter -
  ACI1MU_RS05785 (ACI1MU_05785) - 1074902..1075348 (-) 447 WP_001261222.1 YccF domain-containing protein -
  ACI1MU_RS05790 (ACI1MU_05790) helD 1075472..1077526 (+) 2055 WP_017465794.1 DNA helicase IV -

Sequence


Protein


Download         Length: 201 a.a.        Molecular weight: 23174.94 Da        Isoelectric Point: 8.7403

>NTDB_id=1071730 ACI1MU_RS05775 WP_001202375.1 1072138..1072743(+) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Enteritidis strain S-28456]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG

Nucleotide


Download         Length: 606 bp        

>NTDB_id=1071730 ACI1MU_RS05775 WP_001202375.1 1072138..1072743(+) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Enteritidis strain S-28456]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTACGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5I0N148

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

75.879

99.005

0.751


Multiple sequence alignment