Detailed information NTG1071207

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ABXH30_RS19395
• Genome accession: NZ_CP173259
• Coordinates: 3848290..3849435 (+)
• Length: 381 a.a.
• NCBI ID: WP_017418708.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain XW38
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3843290..3854435

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXH30_RS19375 (ABXH30_19375)	-	3843764..3844480 (-)	717	WP_014306017.1	Crp/Fnr family transcriptional regulator	-
ABXH30_RS19380 (ABXH30_19380)	narK	3844578..3845768 (-)	1191	WP_201489104.1	nitrate transporter NarK	-
ABXH30_RS19385 (ABXH30_19385)	argS	3845903..3847573 (-)	1671	WP_003151071.1	arginine--tRNA ligase	-
ABXH30_RS19390 (ABXH30_19390)	-	3847570..3847998 (-)	429	WP_003151069.1	DUF1934 domain-containing protein	-
ABXH30_RS19395 (ABXH30_19395)	rapF	3848290..3849435 (+)	1146	WP_017418708.1	tetratricopeptide repeat protein	Regulator
ABXH30_RS19400 (ABXH30_19400)	-	3849419..3849538 (+)	120	WP_131242041.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
ABXH30_RS19405 (ABXH30_19405)	speB	3849661..3850533 (-)	873	WP_003151054.1	agmatinase	-
ABXH30_RS19410 (ABXH30_19410)	speE	3850593..3851423 (-)	831	WP_003151052.1	spermidine synthase	-
ABXH30_RS19415 (ABXH30_19415)	-	3851623..3853695 (+)	2073	WP_057080299.1	transglycosylase domain-containing protein	-
ABXH30_RS19420 (ABXH30_19420)	-	3853719..3854150 (-)	432	WP_043867516.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45782.29 Da
• Isoelectric Point: 5.0722

>NTDB_id=1071207 ABXH30_RS19395 WP_017418708.1 3848290..3849435(+) (rapF) [Bacillus velezensis strain XW38]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEEDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=1071207 ABXH30_RS19395 WP_017418708.1 3848290..3849435(+) (rapF) [Bacillus velezensis strain XW38]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAGCTTGCAGGCCTGGAAGAAGATCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTACGCGCGGCAGGCTTATTTAATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACGCAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.341	100	0.703
rapC	Bacillus subtilis subsp. subtilis str. 168	53.421	99.738	0.533