Detailed information NTG1071156

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ABXH30_RS05540
• Genome accession: NZ_CP173259
• Coordinates: 1101065..1102018 (+)
• Length: 317 a.a.
• NCBI ID: WP_201488860.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain XW38
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1096065..1107018

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXH30_RS05515 (ABXH30_05515)	argF	1097884..1098855 (+)	972	WP_003155071.1	ornithine carbamoyltransferase	-
ABXH30_RS05520 (ABXH30_05520)	-	1098931..1099110 (+)	180	WP_003155070.1	YjzC family protein	-
ABXH30_RS05525 (ABXH30_05525)	-	1099146..1099331 (-)	186	WP_003155069.1	YjzD family protein	-
ABXH30_RS05530 (ABXH30_05530)	-	1099592..1100326 (+)	735	WP_069013065.1	hypothetical protein	-
ABXH30_RS05535 (ABXH30_05535)	-	1100409..1100975 (+)	567	WP_041481852.1	hypothetical protein	-
ABXH30_RS05540 (ABXH30_05540)	med	1101065..1102018 (+)	954	WP_201488860.1	BMP family ABC transporter substrate-binding protein	Regulator
ABXH30_RS05545 (ABXH30_05545)	comZ	1102031..1102222 (+)	192	WP_003155061.1	ComZ family protein	Regulator
ABXH30_RS05550 (ABXH30_05550)	-	1102252..1102470 (-)	219	WP_003155059.1	hypothetical protein	-
ABXH30_RS05555 (ABXH30_05555)	-	1102638..1103576 (+)	939	WP_003155057.1	beta-ketoacyl-ACP synthase III	-
ABXH30_RS05560 (ABXH30_05560)	fabF	1103599..1104837 (+)	1239	WP_003155056.1	beta-ketoacyl-ACP synthase II	-
ABXH30_RS05565 (ABXH30_05565)	-	1104921..1105706 (+)	786	WP_012117278.1	DUF2268 domain-containing protein	-
ABXH30_RS05570 (ABXH30_05570)	-	1105880..1106866 (+)	987	WP_003155054.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35329.95 Da
• Isoelectric Point: 4.5594

>NTDB_id=1071156 ABXH30_RS05540 WP_201488860.1 1101065..1102018(+) (med) [Bacillus velezensis strain XW38]
MITRLVMIFSVLLLLSGCTQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHDFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNQTNELPANE

Nucleotide

• Length: 954 bp

>NTDB_id=1071156 ABXH30_RS05540 WP_201488860.1 1101065..1102018(+) (med) [Bacillus velezensis strain XW38]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCACACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTCCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCACCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAACCAATGAGGTCGGTGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAGGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACGACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCGCTGGTGGACA
AAGCGTTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAATCAAACAAATGAACTGCCGGCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.549	100	0.785