Detailed information NTG1071081

Bioinformatically predicted

Overview

• Name: rec2
• Type: Machinery gene
• Locus tag: ACIRXM_RS10555
• Genome accession: NZ_CP173234
• Coordinates: 2149856..2152315 (-)
• Length: 819 a.a.
• NCBI ID: WP_410687913.1
• Uniprot ID: -
• Organism: Avibacterium paragallinarum strain npAP/NC-USA/20240110/S1-1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2144856..2157315

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACIRXM_RS10530 (ACIRXM_10535)	-	2145530..2145661 (+)	132	WP_410686373.1	hypothetical protein	-
ACIRXM_RS10535 (ACIRXM_10540)	kdsB	2145727..2146509 (-)	783	WP_410686376.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACIRXM_RS10540 (ACIRXM_10545)	-	2146506..2146688 (-)	183	WP_035685738.1	Trm112 family protein	-
ACIRXM_RS10545 (ACIRXM_10550)	lpxK	2146863..2147873 (-)	1011	WP_410686378.1	tetraacyldisaccharide 4'-kinase	-
ACIRXM_RS10550 (ACIRXM_10555)	msbA	2147889..2149637 (-)	1749	WP_035685742.1	lipid A ABC transporter ATP-binding protein/permease MsbA	-
ACIRXM_RS10555 (ACIRXM_10560)	rec2	2149856..2152315 (-)	2460	WP_410687913.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ACIRXM_RS10560 (ACIRXM_10565)	thiM	2152805..2153608 (+)	804	WP_035685744.1	hydroxyethylthiazole kinase	-
ACIRXM_RS10565 (ACIRXM_10570)	thiD	2153620..2154438 (+)	819	WP_410686380.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
ACIRXM_RS10570 (ACIRXM_10575)	thiE	2154431..2155093 (+)	663	WP_410686382.1	thiamine phosphate synthase	-
ACIRXM_RS10575 (ACIRXM_10580)	-	2155094..2156314 (+)	1221	WP_410686384.1	NRAMP family divalent metal transporter	-

Sequence

Protein

• Length: 819 a.a.
• Molecular weight: 92392.89 Da
• Isoelectric Point: 9.6590

>NTDB_id=1071081 ACIRXM_RS10555 WP_410687913.1 2149856..2152315(-) (rec2) [Avibacterium paragallinarum strain npAP/NC-USA/20240110/S1-1]
MGLRLDTLLWLVIATGLTLLFVPQSFLLEPKQSAWLAGIAVVGCGVAYWVKHQGIAKFFAYGAIFVLCLADFHYQAEQLL
QQAHAVEGLEKRIEREIRIVEVLHQQDYQTLIATAQLDETLPEQRLYVQWQRAEKVAVGQRWRAELSLRPLSSRLNEGGF
DRQKWYFSKGITAYARVKSAVKISEDFSWREARLQTAFQHTQALSMQGLLLALGFGERAWLKPTHWQIYQKTNTAHLIAI
SGLHIGLAMLLGVGIARGIQFCLPTYWITPMFPLFIGAIIALIYAYLAGFSIPTLRALVALGLVCLVRGLRFYHTPWQYF
QRVVAVLIFCQPLMVLSVSFWLSVGAVASLILWYQYVPLDLFQPRIDLVRQDRPFSLGAIIGKLILRWCVALLHLQLGLL
LVFTPVQLYFFHGFSLAGMIANVFAVPLFSFFLVPLVLFAVLSNGAFSSWQGANELAEKITIFLSNWQHKWIDLSQTQSQ
WIGLGLCALGLSYVFGLWQVQKNHSLNRQKSIPFIQDRTLAKWKWRLNPDKIPSPLCLKKLGIVLCVIFLINSGNLLIKH
FRQPDWRLETLDVGQGLATLIVKEQRGILYDTGAAWQNGSMAELEILPYLRRQGIVLDYLILSHDDNDHAGGAEAVLRAY
PNATLITSSEKIERKTHRTFCFAGTQWQWQGLQISALSPQKVVKRAENNDSCVLLIDDGRHKVLLTGDAESQIEPQFIYK
AGKVDVLQVGHHGSKTSTSEALVKTLQPSIALISSGRGNPWHFPHYAVLARLQAQQSAVLNTADFGQIRLSFSAKKPPPE
NISIDTARGTFSPWYRELL

Nucleotide

• Length: 2460 bp

>NTDB_id=1071081 ACIRXM_RS10555 WP_410687913.1 2149856..2152315(-) (rec2) [Avibacterium paragallinarum strain npAP/NC-USA/20240110/S1-1]
ATTGGCCTGAGGCTCGATACCCTGTTATGGCTTGTGATCGCCACGGGCTTAACCTTGCTTTTTGTGCCGCAATCTTTTTT
GCTTGAGCCAAAGCAAAGTGCGTGGTTGGCGGGAATTGCGGTGGTGGGCTGTGGCGTTGCCTATTGGGTTAAGCATCAAG
GGATAGCGAAATTTTTCGCCTATGGTGCGATATTTGTGCTATGCCTTGCGGATTTTCATTATCAGGCAGAGCAGCTCTTA
CAGCAGGCTCACGCCGTTGAGGGGCTTGAAAAACGCATTGAGCGGGAAATTCGCATTGTCGAAGTACTACATCAGCAAGA
TTATCAAACCCTTATCGCCACCGCTCAGCTTGATGAAACCCTGCCTGAACAACGCCTTTATGTGCAATGGCAAAGGGCGG
AAAAAGTGGCAGTCGGACAGCGTTGGCGAGCGGAATTATCCCTACGTCCATTGTCTAGTCGGCTAAATGAGGGGGGATTT
GATCGGCAAAAATGGTATTTTTCAAAGGGGATTACCGCCTATGCAAGGGTGAAAAGTGCGGTCAAAATTTCGGAGGATTT
TTCTTGGCGGGAAGCAAGGTTACAAACCGCATTTCAGCACACTCAAGCCCTCTCAATGCAAGGGCTATTGCTGGCGTTAG
GGTTTGGTGAACGGGCGTGGTTGAAGCCAACTCATTGGCAAATCTACCAAAAAACCAATACCGCTCATCTTATCGCTATT
TCAGGGCTACATATTGGCTTGGCAATGTTGCTTGGCGTTGGCATTGCTCGAGGGATACAATTTTGCTTGCCGACCTATTG
GATCACGCCGATGTTTCCGCTTTTTATTGGGGCAATAATCGCGTTGATTTATGCCTATTTAGCGGGATTTTCTATTCCCA
CTCTGCGGGCGTTGGTGGCATTGGGACTGGTGTGTTTAGTGCGAGGGTTGCGTTTTTATCACACCCCTTGGCAATATTTT
CAGCGGGTGGTAGCAGTGCTGATTTTCTGCCAGCCGTTAATGGTGCTATCGGTGAGTTTTTGGCTATCAGTAGGGGCAGT
GGCAAGTTTGATTTTATGGTATCAATATGTGCCGTTGGATTTGTTTCAGCCACGAATTGATTTAGTCAGGCAGGATCGCC
CGTTCTCTTTAGGGGCAATAATCGGTAAGCTCATACTACGCTGGTGCGTAGCATTGTTGCATTTGCAACTGGGCTTATTG
TTAGTGTTCACCCCCGTTCAGCTTTACTTTTTTCACGGTTTTTCTTTAGCGGGAATGATCGCGAATGTTTTTGCTGTACC
GTTGTTCAGCTTTTTTCTTGTTCCGCTCGTGCTATTTGCGGTACTCAGCAACGGTGCATTTTCTTCTTGGCAAGGAGCAA
ATGAATTGGCAGAAAAGATCACCATTTTTCTGTCAAATTGGCAACATAAATGGATCGATCTTTCCCAAACGCAATCGCAA
TGGATCGGGCTTGGGCTGTGTGCATTGGGGCTGAGCTATGTTTTTGGCTTATGGCAGGTACAGAAAAATCACTCGCTGAA
TAGGCAAAAATCCATTCCGTTCATTCAGGATCGCACTTTGGCAAAATGGAAATGGAGGTTAAACCCTGACAAAATCCCTT
CGCCCTTATGCTTAAAAAAGCTAGGCATTGTGCTATGTGTTATTTTTCTCATCAATAGTGGAAACTTGCTAATAAAGCAT
TTTCGGCAACCCGATTGGCGGCTTGAAACCCTAGATGTGGGGCAGGGGCTTGCCACCTTGATCGTGAAAGAGCAGCGGGG
GATTTTGTACGATACGGGGGCGGCTTGGCAAAATGGCAGTATGGCAGAATTAGAAATTTTGCCTTATTTACGGCGGCAGG
GCATTGTGCTGGATTACCTTATTTTAAGCCACGACGACAATGATCACGCAGGCGGGGCTGAAGCGGTGTTGCGGGCTTAT
CCCAATGCGACGCTTATTACGTCATCGGAAAAAATCGAGCGAAAAACGCACCGCACTTTTTGTTTCGCGGGAACGCAATG
GCAGTGGCAAGGGTTGCAGATTTCAGCCCTTTCACCGCAAAAGGTGGTGAAACGAGCGGAAAATAATGATTCGTGCGTGC
TGTTGATCGATGATGGGCGGCATAAAGTGTTGCTCACAGGCGACGCGGAAAGCCAAATTGAACCACAGTTTATTTACAAG
GCAGGGAAAGTTGACGTGTTACAGGTCGGACATCACGGCAGCAAAACCTCTACCAGCGAGGCATTGGTGAAAACCTTGCA
ACCTAGCATTGCGTTGATTTCTAGTGGACGGGGAAACCCTTGGCATTTCCCGCATTACGCGGTGTTAGCACGTTTGCAAG
CACAGCAAAGTGCGGTGTTAAATACGGCAGATTTTGGACAAATTCGCCTTTCTTTTTCAGCCAAGAAACCACCGCCTGAA
AATATCAGCATTGACACCGCTCGAGGCACGTTTTCCCCTTGGTATCGGGAATTATTGTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (213-495)

• Metallo-beta-lactamase superfamily (Lactamase_B) (572-754)

• Domain of unknown function (DUF4131) (DUF4131) (33-180)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rec2	Haemophilus influenzae Rd KW20	52.68	93.407	0.492