Detailed information NTG1071004

Bioinformatically predicted

Overview

• Name: rec2
• Type: Machinery gene
• Locus tag: ACIO03_RS11300
• Genome accession: NZ_CP173231
• Coordinates: 2359806..2362265 (+)
• Length: 819 a.a.
• NCBI ID: WP_410679378.1
• Uniprot ID: -
• Organism: Avibacterium paragallinarum strain npAP/OH-USA/20230213/S1-4
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2354806..2367265

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACIO03_RS11280 (ACIO03_11280)	-	2355807..2357027 (-)	1221	WP_410678337.1	NRAMP family divalent metal transporter	-
ACIO03_RS11285 (ACIO03_11285)	thiE	2357028..2357690 (-)	663	WP_035685748.1	thiamine phosphate synthase	-
ACIO03_RS11290 (ACIO03_11290)	thiD	2357683..2358501 (-)	819	WP_410678338.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
ACIO03_RS11295 (ACIO03_11295)	thiM	2358513..2359316 (-)	804	WP_410678339.1	hydroxyethylthiazole kinase	-
ACIO03_RS11300 (ACIO03_11300)	rec2	2359806..2362265 (+)	2460	WP_410679378.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ACIO03_RS11305 (ACIO03_11305)	msbA	2362484..2364232 (+)	1749	WP_410678340.1	lipid A ABC transporter ATP-binding protein/permease MsbA	-
ACIO03_RS11310 (ACIO03_11310)	lpxK	2364248..2365258 (+)	1011	WP_410678341.1	tetraacyldisaccharide 4'-kinase	-
ACIO03_RS11315 (ACIO03_11315)	-	2365432..2365614 (+)	183	WP_410678343.1	Trm112 family protein	-
ACIO03_RS11320 (ACIO03_11320)	kdsB	2365611..2366393 (+)	783	WP_410678344.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 819 a.a.
• Molecular weight: 92295.78 Da
• Isoelectric Point: 9.7904

>NTDB_id=1071004 ACIO03_RS11300 WP_410679378.1 2359806..2362265(+) (rec2) [Avibacterium paragallinarum strain npAP/OH-USA/20230213/S1-4]
MGLRLDTLLWLVIAAGLTLLFVPQSFLLEPKQSAWLAGIAVVGCGVAYWIKRQGLAKFFAYGAIFLLCLADFHYQAEQLL
QQAHAVAGLEKRIEREIRIVEVLHQQDYQTLIATAQLDETQPEQRLYVQWQRAEKVAVGQRWRAKLSLRPLSSRLNEGGF
DRQKWYFSKGITAYARVKSAVKISEDFSWREARLQTAFQHTQALSMQGLLLALGFGERAWLQPTHWQIYQKTNTAHLIAI
SGLHIGLAMLLGVGIARGIQFCLPTHWITPMFPLFIGAIIALIYAYLAGFSIPTLRALVALGLVCLVRGLRFYHTPWQYF
QRVVAVLIFCQPLMVLSVSFWLSVGAVASLILWYQYVPLDLFQPRTDLVRQDRPFSLGAIIGKLILRWCVALLHLQLGLL
LVFTPVQLYFFHGFSLAGMIANVFAVPLFSFFLVPLVLFAVLSNGTFSSWQGANELAEKITIFLSNWQHKWIDLSQTQSQ
WIGLGLCLLGLSYVFYLLRIQKNHSLNRQKSIPFVQDRTLAKWKWRLNPDKIPSVLCLKKLGVVLVLIFLVNGGNLLVTH
FRQPDWRLETLDVGQGLATLIVKEQRGILYDTGAAWQNGSMAELEILPYLRRQGIVLDYLILSHDDNDHAGGAEAVLRAY
PNATLITSSEKIERKTHRTSCFAGTQWQWQGLQISALSPQKVVKRAENNDSCVLLIDDGRHKVLLTGDAESQIEPQFIDK
AGKIDVLQVGHHGSKTSTSEALVKTLQPSIALISSGRGNPWHFPHYAVLARLQAQQSAVLNTADFGQIRLSFSANKPPPE
NISIDTARGMFSPWYRELL

Nucleotide

• Length: 2460 bp

>NTDB_id=1071004 ACIO03_RS11300 WP_410679378.1 2359806..2362265(+) (rec2) [Avibacterium paragallinarum strain npAP/OH-USA/20230213/S1-4]
ATTGGCCTGAGGCTCGATACCCTGTTATGGCTTGTGATCGCCGCGGGCTTAACCTTGCTTTTTGTGCCGCAATCTTTTTT
GCTTGAGCCAAAGCAAAGCGCGTGGCTGGCGGGGATTGCGGTGGTGGGCTGTGGTGTTGCCTATTGGATTAAGCGTCAAG
GACTAGCGAAATTTTTCGCCTATGGTGCGATATTTTTGCTATGCCTTGCGGATTTTCATTATCAGGCAGAGCAGCTCTTA
CAGCAGGCTCACGCCGTTGCGGGGCTTGAAAAACGCATTGAGCGGGAAATTCGCATTGTCGAAGTACTACATCAGCAAGA
TTATCAAACCCTTATCGCCACCGCTCAGCTTGATGAAACCCAGCCTGAACAACGCCTTTATGTGCAATGGCAAAGGGCGG
AAAAAGTGGCAGTCGGACAGCGTTGGCGAGCGAAATTATCCCTACGTCCATTATCTAGTCGGCTAAATGAGGGGGGATTT
GATCGGCAAAAATGGTATTTTTCAAAGGGGATTACCGCCTATGCAAGGGTGAAAAGTGCGGTCAAAATTTCGGAGGATTT
TTCTTGGCGGGAAGCAAGGTTACAAACCGCATTTCAGCACACTCAAGCCCTCTCAATGCAAGGGCTATTGCTGGCGTTAG
GGTTTGGTGAACGGGCGTGGTTGCAGCCAACTCATTGGCAAATTTACCAAAAAACCAATACCGCTCATCTTATCGCTATT
TCAGGGCTACATATTGGCTTGGCGATGTTGCTCGGCGTTGGCATTGCTCGAGGGATACAATTTTGCTTGCCGACTCATTG
GATCACGCCGATGTTTCCGCTTTTTATTGGGGCAATAATCGCGTTGATTTATGCCTATTTAGCGGGATTTTCTATTCCCA
CCCTGCGGGCGTTGGTGGCATTGGGACTGGTGTGTTTAGTGCGAGGGTTGCGTTTTTATCACACCCCTTGGCAATATTTT
CAGCGGGTGGTAGCAGTGCTGATTTTCTGCCAGCCGTTAATGGTGCTATCGGTGAGTTTTTGGCTATCAGTAGGGGCGGT
AGCAAGTTTGATTTTATGGTATCAATATGTGCCGTTGGATTTGTTTCAGCCACGAACTGATTTAGTCAGGCAGGATCGCC
CGTTCTCTTTAGGGGCAATAATCGGTAAGCTCATACTACGCTGGTGCGTAGCATTGTTGCATTTGCAACTGGGCTTATTG
CTAGTGTTTACCCCCGTTCAGCTTTACTTTTTTCACGGTTTTTCTTTAGCGGGAATGATCGCGAATGTTTTTGCTGTACC
GTTGTTCAGCTTTTTTCTTGTTCCGCTCGTGCTATTTGCGGTACTCAGTAATGGCACATTTTCTTCTTGGCAAGGAGCAA
ATGAATTGGCAGAAAAGATCACCATTTTTCTGTCAAATTGGCAACATAAATGGATCGATCTTTCCCAAACGCAATCGCAA
TGGATCGGGTTAGGGTTGTGTTTATTAGGTTTAAGCTATGTTTTTTATTTGTTGCGAATACAGAAAAATCACTCGCTGAA
TAGGCAAAAATCCATTCCGTTCGTTCAGGATCGCACTTTGGCAAAATGGAAATGGAGGTTAAACCCTGACAAAATCCCCT
CAGTATTATGCTTAAAAAAGCTAGGTGTTGTACTGGTGCTTATTTTTCTCGTCAATGGCGGAAATTTGTTGGTAACCCAT
TTTCGGCAACCCGATTGGCGGCTTGAAACCCTTGATGTGGGGCAGGGGCTTGCCACCTTGATCGTGAAAGAGCAGCGGGG
GATTTTGTACGATACGGGGGCAGCTTGGCAAAATGGCAGTATGGCGGAATTAGAAATTTTGCCTTATTTACGGCGGCAGG
GCATTGTGCTGGATTACCTTATTTTAAGCCACGACGATAATGACCACGCAGGCGGAGCTGAAGCGGTGTTGCGGGCTTAT
CCCAATGCGACGCTTATTACGTCATCGGAAAAAATCGAGCGAAAAACGCACCGCACTTCTTGTTTCGCGGGAACGCAATG
GCAGTGGCAAGGGTTGCAGATTTCAGCCCTTTCACCGCAAAAGGTGGTGAAACGAGCGGAAAATAATGATTCGTGCGTGC
TGTTGATCGATGATGGGCGGCATAAAGTGTTGCTCACAGGCGACGCGGAAAGCCAAATTGAACCGCAGTTTATTGATAAG
GCTGGAAAAATTGACGTGTTACAGGTCGGACATCACGGCAGCAAAACCTCTACCAGCGAGGCATTGGTGAAAACCTTGCA
ACCTAGCATTGCGTTGATTTCTAGTGGACGGGGAAACCCTTGGCATTTCCCGCATTACGCGGTGTTAGCACGTTTGCAAG
CACAGCAAAGTGCGGTGTTAAATACGGCAGATTTTGGACAAATTCGCCTTTCTTTCTCAGCCAATAAGCCACCGCCTGAA
AACATCAGCATTGACACCGCTCGAGGCATGTTTTCCCCTTGGTATCGGGAATTATTGTAG

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (33-180)

• Metallo-beta-lactamase superfamily (Lactamase_B) (572-754)

• Competence protein (Competence) (213-495)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rec2	Haemophilus influenzae Rd KW20	52.135	94.383	0.492